DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and Slc2a13

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_001028805.2 Gene:Slc2a13 / 239606 MGIID:2146030 Length:637 Species:Mus musculus


Alignment Length:585 Identity:154/585 - (26%)
Similarity:250/585 - (42%) Gaps:123/585 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 RRLYEMDEMDNKRGENIRHAVPFVRQITEDGKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLVVG 411
            |.|...:...:.:|..:..|..  ||...|..|.. ||             .||...:||..:.|
Mouse    37 RSLLAAESAASLQGAELERAAR--RQFQRDETPAF-VY-------------AAAAFSALGGFLFG 85

  Fly   412 FVSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAGGPLIEYLGRRNTILATAVP 476
            :.:...|.|:: :..|.:....:.|:.  .|.|.:..|.:| .:|||.|...||||:.||..:..
Mouse    86 YDTGVVSGAML-LLRRQMRLGAMWQEL--LVSGAVGAAAVA-ALAGGALNGALGRRSAILLASAL 146

  Fly   477 FIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIG-IL 540
            ..|.|.::|.|.|...:|.||.:.|..:||||:::|||:.|...|.:||.|..:.|.|...| ..
Mouse   147 CTVGSAVLAAAANKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFF 211

  Fly   541 LCFVAGSFM-----NWSMLAFLGAALP--VPFLILMFLIPETPRWFVGRGLEERARKALKWLRGK 598
            ...|.|:|.     .|..:..| ||:|  :.||..:|| ||:|||.:.:|..::||:.|..:||.
Mouse   212 ASVVDGAFSYLQKDGWRYMLGL-AAIPAVIQFLGFLFL-PESPRWLIQKGQTQKARRILSQMRGN 274

  Fly   599 EADVEPELKGLMRSQADADRQASRNTMLELLKLNNLKP----LSISLGLMFFQQFSGINAVIFYT 659
            :. ::.|...:..|..:.:::|:....: :.::.:..|    |.:..||..|||.||||.:::|:
Mouse   275 QT-IDEEYDSIRNSIEEEEKEATAAGPI-ICRMLSYPPTRRALVVGCGLQMFQQLSGINTIMYYS 337

  Fly   660 VQIFKDAGSTIDGNLCTI----IVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLG-- 718
            ..|.:.:|  ::.:...|    |....||:.|.:|:.|:::.||:.|.:.|.....:.|.:|.  
Mouse   338 ATILQMSG--VEDDRLAIWLASITAFTNFIFTLVGVWLVEKVGRRKLTFGSLAGTTVALIILALG 400

  Fly   719 --------------------------GFFYC-------------KTYGPDV-------------- 730
                                      |:.||             |..|..|              
Mouse   401 FLLSAQVSPRVTFRPTTPSDQNTTCTGYSYCNECMLDPDCGFCYKINGSAVIDSSCVPVNKASTT 465

  Fly   731 -----------------SH---------LGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIR 769
                             :|         ..|..|...|:|::.|:.|.||:||.:..||.|...|
Mouse   466 EAAWGRCDNETKFKAEGAHWAYSFCPTPYSWTALVGLVLYLVFFAPGMGPMPWTVNSEIYPLWAR 530

  Fly   770 GSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIE 834
            .:..:.:...||....:|:.||......:..:|||:|:.....|||.||...:|||:||.||:||
Mouse   531 STGNACSAGINWIFNVLVSLTFLHTAEYLTYYGAFFLYAGFAAVGLLFVYGCLPETKGKKLEEIE 595

  Fly   835  834
            Mouse   596  595

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 144/547 (26%)
MFS 401..822 CDD:119392 133/517 (26%)