DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-1 and K09C4.2

DIOPT Version :10

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_001361999.1 Gene:K09C4.2 / 187193 WormBaseID:WBGene00019548 Length:152 Species:Caenorhabditis elegans


Alignment Length:104 Identity:27/104 - (25%)
Similarity:36/104 - (34%) Gaps:35/104 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   751 GFGPIPWLMMGEILPAKIR---GSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAF----WLFG 808
            |...|..|.:.|:.|...|   |.|                ..|..:.|.|.....|    .:|.
 Worm    13 GANAIRLLFVTELFPPSARTVVGQA----------------MLFGSMAVGMPVVSLFPIINSIFS 61

  Fly   809 AICFVGLFFVII----------YVPETQGKTLEDIERKM 837
            .|.||.  |||:          |:|||:|:.:.||...|
 Worm    62 PIFFVP--FVIVQTVFGIYLYRYMPETRGRAVYDIIESM 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 MFS_GLUT6_8_Class3_like 397..832 CDD:340916 24/97 (25%)
K09C4.2NP_001361999.1 MFS <11..89 CDD:475125 23/93 (25%)

Return to query results.
Submit another query.