DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and F48E3.2

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_509266.1 Gene:F48E3.2 / 185981 WormBaseID:WBGene00018603 Length:488 Species:Caenorhabditis elegans


Alignment Length:496 Identity:113/496 - (22%)
Similarity:211/496 - (42%) Gaps:96/496 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 VLAALSVSLGSLVVGFVSAYTSPAL----VSMTDRNITSFEVTQDAGSWVGGIMPLAGLAGGIAG 457
            :|:|:........:|:.:||.:.|:    :.:.:.....:.::.....|....| ||....|.|.
 Worm    10 ILSAVLAITAIFQMGYTNAYPNTAIGSFRIFLNESANEPYTLSNSEFEWAWSAM-LAIYFIGFAA 73

  Fly   458 GPLI-----EYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFLAGFCVGIASLSLPVYLG- 516
            |.:|     :.:||:.|:.......::|||:...|:.:.|.|    :.||...:.|||..:.:. 
 Worm    74 GSVISAGVADRIGRKWTLFLGTCGSLLSSLIALFAIILKMPL----MFGFSRLVMSLSAAISMNG 134

  Fly   517 ------ETVQPEVRGTLGL-LPTAFGNIGILLCFVAGSFMNWSMLAFLGAALPVPFLILMFLIPE 574
                  |:....:||.:.. ...||    ::...:.|.|   .|.:.||.  .:..||.:.:||.
 Worm   135 LILLFQESSPSHMRGLISFNAEMAF----VITNLIGGLF---GMQSILGQ--NIVGLIAVSIIPS 190

  Fly   575 TPRWFVGRGLEERARKALKWLRGKEADVEPELKGLMRSQADADRQASRNTM----LELLKLNNLK 635
            :...|:...|:|    :.|:|..|:.|.....:.|...|...|.:...|.:    ||..::.:.|
 Worm   191 SVACFLTVFLKE----SPKYLFLKKHDATEAGRALQFYQNIKDEEEKMNVLNDLKLEKEEMGHQK 251

  Fly   636 PLSI-------------SLGLMFFQQFSGINAVIFYTVQIFKDAG-------STIDGNLCTIIVG 680
            ..|:             .|||...|..:.:..|:||:.....|||       |...|.|      
 Worm   252 NGSLFDIMANQPVRRGFLLGLATMQLTASVWPVVFYSTDFLMDAGFSYELSESVSTGML------ 310

  Fly   681 IVNFLATFIGIVLIDRAGRKILLYVS---DIAMVLTLFVLGGFFYCKTYGPDVSH----LGWLPL 738
            .::.|:|.:|:.::::..||.||..:   :||.:| :|.|...         :||    :|:..:
 Worm   311 FLSSLSTIVGMFIVEKYSRKWLLIGTASVNIAAIL-VFSLSAI---------LSHYWTWIGYGCI 365

  Fly   739 TCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNW-------FCTFVVTKTFQDLTV 796
            .|.:::.:.:|:..|||.|.:..|::|...|.::.|:..|.|.       |.||.:.||...:|:
 Worm   366 ICLILHGISYSVAMGPIAWFITSELVPINFRAASQSLVLALNHTVALVLAFLTFPLYKTIGPITL 430

  Fly   797 AMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIERKM 837
            .:    .|.:.|.:|.:   .:|:|:|||:.|.:..|..::
 Worm   431 VI----FFVIPGILCII---MLILYLPETKDKHINVIVEQL 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 112/490 (23%)
MFS 401..822 CDD:119392 105/475 (22%)
F48E3.2NP_509266.1 MFS_GLUT_Class1_2_like 12..455 CDD:340915 110/483 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4448
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.870

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