DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and C03B1.13

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_509061.3 Gene:C03B1.13 / 180910 WormBaseID:WBGene00015381 Length:506 Species:Caenorhabditis elegans


Alignment Length:488 Identity:107/488 - (21%)
Similarity:169/488 - (34%) Gaps:141/488 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 LGSLVVGFVSAYTSPALVSMTDRNITSFEVTQDAGSWVG-----GIMPLAGLAGGIAGGPLIEYL 464
            ||.|:|.|::                         .|:|     |||.:|...|           
 Worm    78 LGFLMVPFLT-------------------------KWIGVKRAQGIMCIAATIG----------- 106

  Fly   465 GRRNTILATAVPFIVSSLLIACAVNVAMVL-CGRFLAGFCVGIASLSLPVYLGETVQPEVRGTLG 528
                    ..|.|:..|.|....|..|.:| .||.:.|...|.:...||:|:.|......|..|.
 Worm   107 --------VGVHFLALSFLSLGEVTFATILSIGRLMIGLQAGSSLCLLPLYIIEISPAHYRSFLN 163

  Fly   529 LLPTAFGNIGILLCFVAGS----------FMNWSMLAFLGAALPVPFLILMFLI-PETPRW---F 579
            .......:...||..|.||          |    .:..:.|.:|:.||:.:.:| |.||.:   |
 Worm   164 NFQQVSQSFATLLGLVLGSEEILPLGSSRF----FIMQISAVIPILFLLFVLIITPPTPNYLSHF 224

  Fly   580 VGRGLEERARKALKWLRGKEADVEPELKGLMRSQADADRQASRN-TMLELLKLNNLKPLSISLGL 643
            ....:.|.....| :..|.|             ::::.|....| .|:|    |.......:.|.
 Worm   225 HPECIHEAIHSKL-FYHGTE-------------RSNSYRPLISNYEMME----NKFTSKYANYGK 271

  Fly   644 MFFQQFSG--INAVIFYTVQIF-KDAGSTIDGNLC-----------------TIIV----GIVNF 684
            .:.:.|.|  |.|::..:.... .|...|...|:.                 ||:|    |:|.|
 Worm   272 SWRESFKGFLIGAIVAASYAFTGDDLIDTFSSNMLIGEEKSSKKIHQTTDTFTILVSDGLGLVLF 336

  Fly   685 LATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGFFYCKTYGPDVSHLGWLPLT--------CF 741
            .|:..||.|.||.||:.|             ||.|.|     |..|:::|.:..|        ||
 Worm   337 FASLFGIYLADRFGRRKL-------------VLVGLF-----GTCVANIGAVVFTTNKVIVSLCF 383

  Fly   742 VIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTV--AMGAHGAF 804
            ........:|.|...|.:..|::..:.......::|......|.:  :||..|||  .:|.:...
 Worm   384 AATKTFIGIGCGGPAWFLTSELVDPEYAWIFQPLSTGILLSTTMI--ETFFYLTVDNLVGGYSLL 446

  Fly   805 WLFGAICFVGLFFVIIYVPETQGKTLEDIERKM 837
            .|......|....:.:|:|||:|::.|:|:..:
 Worm   447 ILAAGPALVAAILIYLYLPETKGRSSEEIQNML 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 106/482 (22%)
MFS 401..822 CDD:119392 100/471 (21%)
C03B1.13NP_509061.3 MFS 12..470 CDD:391944 104/477 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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