DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and K09C4.1

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_001041269.2 Gene:K09C4.1 / 180621 WormBaseID:WBGene00019547 Length:521 Species:Caenorhabditis elegans


Alignment Length:495 Identity:112/495 - (22%)
Similarity:201/495 - (40%) Gaps:80/495 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 LAALSVSLGSLVVGFVSAYTSPAL--VSMTDRNI----TSFEVTQDAGSWVGGIMPLAGLAGGIA 456
            :..|:.|..:.:|..::.||..|.  ::.|:.::    :.|.||.:.|:.:..|..|        
 Worm    25 MQVLTFSALAELVNQMNNYTLSAHFGITPTETSVGVLNSIFAVTHETGNALAIIFLL-------- 81

  Fly   457 GGPLIEYLGRRNTILATAVPFIVSSL-----LIACAVNVA-MVLCGRFLAGFCVGIASLSLPVYL 515
              |:.:..||:  .:|..:.|.:..|     |:|.:...| ....|:...|....:..|..|:|:
 Worm    82 --PVADSRGRK--FMAVYLRFALLFLTGFFHLLATSFQAAEAYTLGQLFLGIQSPLHLLITPMYI 142

  Fly   516 GETVQPEVRGTLGLLPTAFGNIGILLCFVA------GSFMNWSMLAFLGAALPVPFLILMFLIPE 574
            .|......||..........:||.||.|.|      |:..:|.::........|..|.||..:|:
 Worm   143 LECAPDNCRGFASTALIFSFSIGKLLMFSAASPTFLGTIDSWFIIPLFEMVCSVMILCLMIHLPD 207

  Fly   575 TPRWFVGRGLEERARKALKWLRGKEADVEPELKGLMRSQADADRQASRNTMLELLKLNNLKPLSI 639
            :|:|.:.:...::|..::|:..||...::..:..|::     ::..:::..:.|.::.....|..
 Worm   208 SPKWLIQQNKVKKAEDSIKFYYGKHCHLDEVVTSLIK-----EKNLTKDNRISLRQIWENDTLRE 267

  Fly   640 SLGLMF----FQQFSGINAVIFYTVQIFKDAGSTIDGNL-CTIIVGIVNFLATFIGIVLIDRAGR 699
            ||.::|    |.||....|...||:...|.||.|:...| ..:|:..|.|...|||.:.:|..||
 Worm   268 SLKILFAVTVFLQFDTTTAQSVYTIDFHKTAGFTVQEALNINLILTTVLFPTKFIGTLFLDALGR 332

  Fly   700 KILLYVSDI----------AMVLTLFVLGGFFYCKTYGPDVSHLGWL-PLTCFVIYILGFSLGFG 753
            :..:.|:.:          |..:.:|:.|.....|.....|..|..| |:|           |..
 Worm   333 RPAMGVAGVMKYSKSMLLLAFEILVFISGSSLITKIMYVAVELLTILVPVT-----------GAN 386

  Fly   754 PIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVG---- 814
            .|..|.:.|:.|...| :|...|..|.   :..|......|...:.:     :|..|.||.    
 Worm   387 SIRVLFVTELFPPSAR-TAVGQAMLFG---SMAVNSPIVALYPIVNS-----IFPPIFFVPFVIS 442

  Fly   815 --LFFVIIY--VPETQGKTLEDIERKMMGRV-RRMSSVAN 849
              :|.:.:|  :|||:|:.:.||...:...| .|.:||.:
 Worm   443 QMIFGIYLYRHMPETRGRAVYDIIESLDRNVASRTASVTD 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 106/476 (22%)
MFS 401..822 CDD:119392 102/462 (22%)
K09C4.1NP_001041269.2 MFS 32..460 CDD:391944 103/464 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158132
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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