DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and hmit-1.1

DIOPT Version :10

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:582 Identity:157/582 - (26%)
Similarity:253/582 - (43%) Gaps:145/582 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 RPTTNP-IYIWTQVLAALSVSLGSLVVGFVSAYTSPALVSMTDRNITSFEVTQDAGSWVGGIMPL 448
            :|...| :.::..:|||.|| :|..:.|:.::..|.|::.|.|               ..|:.|:
 Worm    14 KPAHTPKLGLFVYILAAASV-IGGFLFGYDTSVVSAAMLYMPD---------------APGLKPM 62

  Fly   449 ------------AGLA--GGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVAMVLCGRFL 499
                        .|:|  |.:..|...:|:|||..||..:..|.:.:|:.|.:||..|:|.||.|
 Worm    63 DTVWQEVLVSISPGMAAVGSLMSGTSSDYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVL 127

  Fly   500 AGFCVGIASLSLPVYLGETVQPEVRGTL---GLLPTAFGNIGILLCFVAGSF-------MNWSML 554
            .|..:|.||:.:|||||||....|||.|   ..|..:||.  ::.....|:|       :.|.::
 Worm   128 LGIAIGFASMIVPVYLGETAPTHVRGMLVAAFALMISFGQ--VVANITGGAFSYIDPYNVGWRLM 190

  Fly   555 AFLGAALP--VPFLILMFLIPETPRWFVGRGLEERARKAL-KWLRGKEADVEPELKGLMRSQADA 616
             |..||:|  :.|:..||| ||||||....|.|...|:.| |...|.:..||.|:..::....|.
 Worm   191 -FAFAAVPSIIQFVCFMFL-PETPRWLYENGFETETREVLEKVYNGDKEWVEYEMAEIIAFNEDQ 253

  Fly   617 DRQ-----ASRNTMLELLKLNN-LKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGNLC 675
            .::     ||...:..:||..: ||...|...|..|||.:|||.:::||..|.:.:|  |..|..
 Worm   254 AKENEKAHASGPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSSG--ISNNHT 316

  Fly   676 TI----IVGIVNFLATFIGIVLIDRAGRKILLYVSDIAMVLTLFVLGGFF--------------- 721
            ||    ::.:.||:..|:.:.||::.||:|:...|...:||:|..:|..|               
 Worm   317 TIWISVLLSLCNFIGPFVPMSLIEKVGRRIIFLFSCGLVVLSLVFIGVAFLLVNHDSAATLPANQ 381

  Fly   722 ----------------------YCKTY----------------------GPDV------------ 730
                                  ||.|.                      .|:|            
 Worm   382 YGSNFNSSYPDAKGCMAYSNCDYCVTTDACGFCHDANTKQGYCLPAGFDNPEVYSSTGSCTNSNG 446

  Fly   731 ---SHLGW-----------LPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNW 781
               ::..|           ||:....:|:|.||.||..:||::..|..|...|.:..:::|..||
 Worm   447 SIANNFKWEKYYCDTKYTLLPIIACGVYLLTFSSGFTSLPWVLNSEFYPMWARSTCVAISTTSNW 511

  Fly   782 FCTFVVTKTFQDLTVAMGAHGAFWLFGAICFVGLFFVIIYVPETQGKTLEDIERKMMGRVRR 843
            ....::..|:..||..:|.:|||||:..:..:...|::..||||:|.::|::|...|.:.:|
 Worm   512 VFNLIIALTYLSLTQVIGKYGAFWLYAGLTVIAFIFILFLVPETKGYSIEEVEMLFMNKKQR 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 MFS_GLUT6_8_Class3_like 397..832 CDD:340916 151/556 (27%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 144/544 (26%)

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