DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and R09B5.11

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_503413.2 Gene:R09B5.11 / 178634 WormBaseID:WBGene00019979 Length:516 Species:Caenorhabditis elegans


Alignment Length:498 Identity:133/498 - (26%)
Similarity:230/498 - (46%) Gaps:69/498 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 WTQVL--AALSVSLGSLVVGF-VSAYTSPALVSMTDRNITSFEVTQDAGS-------W--VGGIM 446
            ||..|  ...|::|.|...|| :....:|..:.:.......||:..:..|       |  ...:.
 Worm    43 WTPFLFFCISSIALASFQDGFQIGCINAPGPLIIDWIKKCHFELFGEVLSQYQADFIWSVAVSMF 107

  Fly   447 PLAGLAGGIAGGPLIEYLGRRNTILATAVPFIVSSLLIACAVNVA-------MVLCGRFLAGFCV 504
            .:.|:.|....|.|.:..||::|:|...    :.:||.|..::.:       |::.||||.|...
 Worm   108 SVGGMFGSFCSGFLADKFGRKSTLLYNN----ILALLAAVCLSTSKLFNFYPMIVFGRFLVGLNC 168

  Fly   505 GIASLSLPVYLGETVQPEVRGTLGLLPTAFGNIGILLCFVA----------GSFMNWSMLAFLGA 559
            ||.|..:|::|.|.....:||..|    :|..:.|.:..|.          |:.:.|   .::.|
 Worm   169 GITSGLVPMFLTELAPANLRGKCG----SFHQLNISVAIVLSQALGLPQIFGTQVGW---PYIFA 226

  Fly   560 ALPVPFLILMFLIP---ETPRWFVGR-GLEERARKALKWLRGKEADVEPELKGLMRSQADADRQA 620
            .:.:|..:.:..||   |:|::.:.: ...|.||:.|:.||| ...|:.||:.:::.........
 Worm   227 CVAIPTFLQLATIPFCVESPKYLISKLNDREEARRILEKLRG-HTKVDEELEHMVQETMVTVEPL 290

  Fly   621 SRNTMLELLKLNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDGN---LCTIIVGIV 682
            .:...:.|.|.:|..|:.:|:.:||.||||||:||.||:..|||..|  :.||   ..|:..|.:
 Worm   291 HQPGYVSLFKGDNQWPMIVSILMMFSQQFSGISAVTFYSTLIFKRNG--LSGNEPMYATVGFGCI 353

  Fly   683 NFLATFIGIVLID--RAGRKIL-------LYVSDIAMVLTLFVLGGFFYCKTYGPDVSHLGWLPL 738
            ..:|||..:.|||  :.|||.|       :.:|.|.:|:||.:....::..:|         :.:
 Worm   354 KLIATFGCLFLIDHPKFGRKRLHIAGLSGMCISSILIVITLTLSNAGYHWASY---------MNV 409

  Fly   739 TCFVIYILGFSLGFGPIPWLMMGEILPAKIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGA 803
            ...:.:::.|:.|.|||||....|:..:..||.||:|:...||...::|..||..:...:..: |
 Worm   410 LFILSFVVTFAFGPGPIPWFFTSELFDSATRGRAAAVSATSNWVANWMVGLTFLPINNIIHQY-A 473

  Fly   804 FWLFGAICFVGLFFVIIYVPETQGKTLEDIERKMMGRVRRMSS 846
            |.:|....|....|...:||||:||:...|.:::....:|:.|
 Worm   474 FLMFTFFTFTFAIFTWKFVPETKGKSPSAIRKELAFMRKRICS 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 130/483 (27%)
MFS 401..822 CDD:119392 121/463 (26%)
R09B5.11NP_503413.2 Sugar_tr 54..499 CDD:278511 125/468 (27%)
MFS 90..465 CDD:119392 108/397 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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