DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-1 and F13B12.2

DIOPT Version :9

Sequence 1:NP_610693.1 Gene:Tret1-1 / 36248 FlyBaseID:FBgn0050035 Length:857 Species:Drosophila melanogaster
Sequence 2:NP_501925.2 Gene:F13B12.2 / 177935 WormBaseID:WBGene00008730 Length:512 Species:Caenorhabditis elegans


Alignment Length:520 Identity:117/520 - (22%)
Similarity:214/520 - (41%) Gaps:98/520 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 ENIRHAVP---------FVRQITED-GKPKLEVYRPTTNPIYIWTQVLAALSVSLGSLVVGF--- 412
            :.:..|||         .:|.:.|| ||                ...:..:::.|..|.||:   
 Worm     2 KQVTAAVPNAIFGQNSFMIRNVIEDQGK----------------VVFICLITILLSILPVGYYIV 50

  Fly   413 ---VSAYTSPALVSMTDRNITSFEVTQDAGSWVGGI----MPLAGLAGGIAGGPLIEY-----LG 465
               |......|.:.....||...::::...|.|..:    ..:..|.|.:...|:.::     |.
 Worm    51 LLNVPEKVFQAFIFDHFENIFGLQLSKTEESLVWSLTVSSQGVGALIGCLIVSPISKFGAKDVLM 115

  Fly   466 RRNTILATAVPFIVSSLLIACAVNVAM---VLCGRFLAGFCVGIASLSLPVYLGETVQPEVRGTL 527
            |.|.::     .|..|||:..:..:..   .:.||.|.|...|:|....|:||.:.:...::|::
 Worm   116 RLNNVI-----LIAGSLLMFLSYWITFPIAFIVGRILTGVYTGLACAFAPLYLQQIIPKNIKGSM 175

  Fly   528 GL---LPTAFG-NIGIL--LCFVAGSFMNWSMLAFLGAALPVPFLILMFLIPETPRWFVGRGLEE 586
            ..   :...|| ::|.:  |.|:.||...|.:|..|.|...:..|...:.||:||...:..|...
 Worm   176 SCFLHIAVCFGSSLGAIFSLPFMFGSETTWPILVVLPAGFGIIMLAASYFIPDTPNNLLQMGRYT 240

  Fly   587 RARKALKWLRGKEADVEPELKGLMRSQADADRQASRNTMLELLKL-----NNLKPLSISLGLMF- 645
            .|.:::|:....|...|.|   :::...|...:     |.|.|.|     |:.....|.||::. 
 Worm   241 EAIESIKFYYDIEDSDEDE---IIKEYWDMVPE-----MPEQLSLCSAFSNSSIRRGILLGMVVS 297

  Fly   646 -FQQFSGINAVIFYTVQIFKDAGSTIDGNLCTIIVGIVNFLATFIGIVL-------IDRAGRK-I 701
             .|.|||....|.|:.::| :|.|.||     |:|..:..|.:.:.|:|       ::..||: :
 Worm   298 ATQIFSGSMVTISYSTEMF-EAVSFID-----ILVPFLPALGSILSILLTIPALRWVETRGRRPL 356

  Fly   702 LLYVSDIAMVLTLFVLGGFFYCKTYGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWLMMGEILPA 766
            ||......::..:|:|   .:............|.....|.:|.:|::||.||:.:.:..|::|.
 Worm   357 LLKTLMFCIIANVFLL---IFTLISSDSSGWASWGFAAAFFMYGIGYNLGVGPVAYFLPAELVPP 418

  Fly   767 KIRGSAASVATAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICFV---GLFFVIIY--VPETQ 826
            :...::...|.|.||.||...|..:..|:..:|.    |.:  :.|:   .:|.:|::  :|||:
 Worm   419 EAASASLGAAVAVNWICTITTTLFYYPLSKTVGG----WSY--LIFIIPTSIFSMILWRLLPETK 477

  Fly   827  826
             Worm   478  477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-1NP_610693.1 SP 382..833 CDD:273317 109/489 (22%)
MFS 401..822 CDD:119392 106/464 (23%)
F13B12.2NP_501925.2 MFS_GLUT_Class1_2_like 34..479 CDD:340915 109/472 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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