Protein Alignment Roc2 and AT3G42830

DIOPT Version :9

• Sequence 1: NP_001163119.1
• Gene: Roc2 / 36246
• FlyBaseID: FBgn0044020
• Length: 113
• Species: Drosophila melanogaster
• Sequence 2: NP_189869.1
• Gene: AT3G42830 / 823327
• AraportID: AT3G42830
• Length: 115
• Species: Arabidopsis thaliana
• Alignment Length: 106
• Identity: 46/106 - (43%)
• Similarity: 63/106 - (59%)
• Gaps: 5/106 - (4%)

  Fly     7 NSVDRPTDDGDAGKPEKMFTLKKWNAVAMWSWDVECDICAICRVQVMDSCLRCQADNKRDVMGRQ 71
            :|:..|:   .:.|..|.|.||||:|||:|:||:..|.|||||..:||.|:.|.|:.....  .:
plant    14 SSISVPS---SSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMDLCIECLANQASAT--SE 73

  Fly    72 DCVVVWGECNHSFHHCCMSLWVKQNNRCPLCQQEWSIQRMG 112
            :|.|.||.|||:||..|:|.|:|....|||...||..|:.|
plant    74 ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYG 114

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Roc2	NP_001163119.1	RING	23..112	CDD:302633	42/88 (48%)
		zf-rbx1	25..103	CDD:289448	38/77 (49%)
AT3G42830	NP_189869.1	mRING-H2-C3H2C2D_RBX1	47..108	CDD:319399	27/62 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5194
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54028
OrthoDB	1	1.010	-	-		D1587140at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11210
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.930