Protein Alignment Roc2 and lmgA

DIOPT Version :9

• Sequence 1: NP_001163119.1
• Gene: Roc2 / 36246
• FlyBaseID: FBgn0044020
• Length: 113
• Species: Drosophila melanogaster
• Sequence 2: NP_001097122.1
• Gene: lmgA / 5740853
• FlyBaseID: FBgn0250903
• Length: 85
• Species: Drosophila melanogaster
• Alignment Length: 84
• Identity: 30/84 - (35%)
• Similarity: 42/84 - (50%)
• Gaps: 10/84 - (11%)

  Fly    26 TLKKWNAVAMWSWDVECDICAICRVQVMDSCLRCQADNKRDVMGRQDCVVVWGECNHSFHHCCMS 90
            |:|.|..||.|.|....:.|.|||:....:|..|       .:...||.:|||.|:|.||..|:.
  Fly     4 TIKSWTGVATWRWIANDENCGICRMSFESTCPEC-------ALPGDDCPLVWGVCSHCFHMHCIV 61

  Fly    91 LWVK---QNNRCPLCQQEW 106
            .|:.   .|.:||:|:|.|
  Fly    62 KWLNLQPLNKQCPMCRQSW 80

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Roc2	NP_001163119.1	RING	23..112	CDD:302633	30/84 (36%)
		zf-rbx1	25..103	CDD:289448	27/79 (34%)
lmgA	NP_001097122.1	RING_Ubox	1..82	CDD:418438	30/84 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463169
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5194
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11210
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.840