DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roc2 and rnf7

DIOPT Version :9

Sequence 1:NP_001163119.1 Gene:Roc2 / 36246 FlyBaseID:FBgn0044020 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_001012516.1 Gene:rnf7 / 503534 ZFINID:ZDB-GENE-050220-12 Length:113 Species:Danio rerio


Alignment Length:111 Identity:78/111 - (70%)
Similarity:89/111 - (80%) Gaps:5/111 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DDPENSVDRPTDDGDAGKPEKMFTLKKWNAVAMWSWDVECDICAICRVQVMDSCLRCQADNKRDV 67
            |:|..........|.....:|||:|||||||||||||||||.||||||||||:||||||:||   
Zfish     8 DEPGLGHSHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENK--- 69

  Fly    68 MGRQDCVVVWGECNHSFHHCCMSLWVKQNNRCPLCQQEWSIQRMGK 113
              ::||||||||||||||:||||||||||||||||||:|.:||:||
Zfish    70 --QEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roc2NP_001163119.1 RING 23..112 CDD:302633 73/88 (83%)
zf-rbx1 25..103 CDD:289448 65/77 (84%)
rnf7NP_001012516.1 RING 28..112 CDD:302633 73/88 (83%)
zf-rbx1 30..103 CDD:289448 65/77 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596832
Domainoid 1 1.000 118 1.000 Domainoid score I5831
eggNOG 1 0.900 - - E1_COG5194
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H84476
Inparanoid 1 1.050 181 1.000 Inparanoid score I3978
OMA 1 1.010 - - QHG54028
OrthoDB 1 1.010 - - D1587140at2759
OrthoFinder 1 1.000 - - FOG0006281
OrthoInspector 1 1.000 - - oto39458
orthoMCL 1 0.900 - - OOG6_108571
Panther 1 1.100 - - LDO PTHR11210
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1071
SonicParanoid 1 1.000 - - X4568
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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