DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roc2 and rnf7

DIOPT Version :10

Sequence 1:NP_610691.1 Gene:Roc2 / 36246 FlyBaseID:FBgn0044020 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_001012516.1 Gene:rnf7 / 503534 ZFINID:ZDB-GENE-050220-12 Length:113 Species:Danio rerio


Alignment Length:111 Identity:78/111 - (70%)
Similarity:89/111 - (80%) Gaps:5/111 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DDPENSVDRPTDDGDAGKPEKMFTLKKWNAVAMWSWDVECDICAICRVQVMDSCLRCQADNKRDV 67
            |:|..........|.....:|||:|||||||||||||||||.||||||||||:||||||:||   
Zfish     8 DEPGLGHSHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENK--- 69

  Fly    68 MGRQDCVVVWGECNHSFHHCCMSLWVKQNNRCPLCQQEWSIQRMGK 113
              ::||||||||||||||:||||||||||||||||||:|.:||:||
Zfish    70 --QEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roc2NP_610691.1 RING-H2_RBX2 42..106 CDD:438129 52/63 (83%)
rnf7NP_001012516.1 RING-H2_RBX2 47..106 CDD:438129 52/63 (83%)

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