DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Roc2 and Rnf7

DIOPT Version :10

Sequence 1:NP_610691.1 Gene:Roc2 / 36246 FlyBaseID:FBgn0044020 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_001100318.1 Gene:Rnf7 / 300948 RGDID:1311048 Length:113 Species:Rattus norvegicus


Alignment Length:118 Identity:83/118 - (70%)
Similarity:94/118 - (79%) Gaps:10/118 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAD--DPENSVDRPTDDGDAGKP---EKMFTLKKWNAVAMWSWDVECDICAICRVQVMDSCLRCQ 60
            |||  |.|......:..|.||..   :|||:|||||||||||||||||.||||||||||:|||||
  Rat     1 MADVEDGEEPCVLSSHSGSAGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQ 65

  Fly    61 ADNKRDVMGRQDCVVVWGECNHSFHHCCMSLWVKQNNRCPLCQQEWSIQRMGK 113
            |:||     ::||||||||||||||:||||||||||||||||||:|.:||:||
  Rat    66 AENK-----QEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roc2NP_610691.1 RING-H2_RBX2 42..106 CDD:438129 52/63 (83%)
Rnf7NP_001100318.1 RING-H2_RBX2 47..106 CDD:438129 52/63 (83%)

Return to query results.
Submit another query.