DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roc2 and Rnf7

DIOPT Version :9

Sequence 1:NP_001163119.1 Gene:Roc2 / 36246 FlyBaseID:FBgn0044020 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_035409.1 Gene:Rnf7 / 19823 MGIID:1337096 Length:113 Species:Mus musculus


Alignment Length:118 Identity:83/118 - (70%)
Similarity:94/118 - (79%) Gaps:10/118 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAD--DPENSVDRPTDDGDAGKP---EKMFTLKKWNAVAMWSWDVECDICAICRVQVMDSCLRCQ 60
            |||  |.|......:..|.||..   :|||:|||||||||||||||||.||||||||||:|||||
Mouse     1 MADVEDGEEPCVLSSHSGSAGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQ 65

  Fly    61 ADNKRDVMGRQDCVVVWGECNHSFHHCCMSLWVKQNNRCPLCQQEWSIQRMGK 113
            |:||     ::||||||||||||||:||||||||||||||||||:|.:||:||
Mouse    66 AENK-----QEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roc2NP_001163119.1 RING 23..112 CDD:302633 73/88 (83%)
zf-rbx1 25..103 CDD:289448 65/77 (84%)
Rnf7NP_035409.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 8/24 (33%)
RING-H2_RBX2 47..106 CDD:319380 52/63 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850804
Domainoid 1 1.000 118 1.000 Domainoid score I5834
eggNOG 1 0.900 - - E1_COG5194
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H84476
Inparanoid 1 1.050 181 1.000 Inparanoid score I3970
Isobase 1 0.950 - 0 Normalized mean entropy S381
OMA 1 1.010 - - QHG54028
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006281
OrthoInspector 1 1.000 - - otm42617
orthoMCL 1 0.900 - - OOG6_108571
Panther 1 1.100 - - LDO PTHR11210
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1071
SonicParanoid 1 1.000 - - X4568
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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