DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roc2 and rbx-1

DIOPT Version :10

Sequence 1:NP_610691.1 Gene:Roc2 / 36246 FlyBaseID:FBgn0044020 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_505496.1 Gene:rbx-1 / 179358 WormBaseID:WBGene00004320 Length:110 Species:Caenorhabditis elegans


Alignment Length:91 Identity:43/91 - (47%)
Similarity:61/91 - (67%) Gaps:2/91 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EKMFTLKKWNAVAMWSWDVECDICAICRVQVMDSCLRCQADNKRDVMGRQDCVVVWGECNHSFHH 86
            :|.|.:|||:|||:|:||::.|.|||||..:||.|:.|||:....:  :.:|.|.||.|||:||.
 Worm    21 KKRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGL--KDECTVAWGNCNHAFHF 83

  Fly    87 CCMSLWVKQNNRCPLCQQEWSIQRMG 112
            .|:|.|:|....|||..:||..|:.|
 Worm    84 HCISRWLKTRQVCPLDNREWEFQKYG 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roc2NP_610691.1 RING-H2_RBX2 42..106 CDD:438129 28/63 (44%)
rbx-1NP_505496.1 APC11 22..110 CDD:227521 43/90 (48%)

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