DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roc2 and LOC1274908

DIOPT Version :10

Sequence 1:NP_610691.1 Gene:Roc2 / 36246 FlyBaseID:FBgn0044020 Length:113 Species:Drosophila melanogaster
Sequence 2:XP_314102.2 Gene:LOC1274908 / 1274908 VectorBaseID:AGAMI1_008111 Length:109 Species:Anopheles gambiae


Alignment Length:110 Identity:49/110 - (44%)
Similarity:65/110 - (59%) Gaps:3/110 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DDPENSVDRPTDDGDAGKPEKMFTLKKWNAVAMWSWDVECDICAICRVQVMDSCLRCQADNKRDV 67
            |..|...:.||.....|: .|.|.:|||||||:|:||:..|.|||||..:||.|:.|||:.....
Mosquito     2 DIDEEEFEAPTSSSSRGE-RKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASAT 65

  Fly    68 MGRQDCVVVWGECNHSFHHCCMSLWVKQNNRCPLCQQEWSIQRMG 112
              .::|.|.||.|||:||..|:|.|:|....|||..:||..|:.|
Mosquito    66 --SEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYG 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roc2NP_610691.1 RING-H2_RBX2 42..106 CDD:438129 28/63 (44%)
LOC1274908XP_314102.2 mRING-H2-C3H2C2D_RBX1 41..102 CDD:438148 28/62 (45%)

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