DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and AT4G30640

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_567849.1 Gene:AT4G30640 / 829187 AraportID:AT4G30640 Length:301 Species:Arabidopsis thaliana


Alignment Length:361 Identity:79/361 - (21%)
Similarity:129/361 - (35%) Gaps:121/361 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 GATELDDELI---KQLPKEVLLRVFSYLDVVSLCRCAQ---------VCKYWNVLALDGSSWQKI 283
            |..|:...|.   .:|.:|.||.:||        |.:|         |.|.|.....|.:    :
plant     8 GKVEMGSGLYPDWSELTRECLLDIFS--------RLSQEQRWIGPMLVSKNWMNACYDPT----L 60

  Fly   284 N-LFDFQR--------------DIEGPV---IENISQRCRGFLKSLSLRGCQSVGDQSVRTLANH 330
            | :||.:.              :.|..|   :.::..|..|.|..:.:|.|.   ::|:...|..
plant    61 NTIFDLETRFLSFPESINWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCT---ERSLSYAAER 122

  Fly   331 CHNIEHLDLSDCKKITDISTQSISRYCSKLTAINLHSCSNITDNSLKYLSDGCPNLMEINVSWCH 395
            |.|:|.|.:.:|..:||.|.:.|        |:|                  ||||.|:::|:.:
plant   123 CPNLEVLWIKNCPNVTDASMEKI--------AMN------------------CPNLRELDISYSY 161

  Fly   396 LISENGVEALARGCVKLRKFSSKGCKQINDNAIMCLAKYCPDLMVLNLHSCETITDSSIRQLAA- 459
            .|:...:..|.|.|..|        |.:..|.:..|....|.::            :.:..||. 
plant   162 GITHESLITLGRSCQNL--------KILKRNLLPRLGPSLPTIV------------APLDYLATF 206

  Fly   460 -NCHKLQKLCVSKCADLTDLTLLSLSQHNHL---LNTLEVSGCRNFTDIGFQALGRNCKYLERMD 520
             ....::...:.|          .::|..||   .:||        |..|..::.:.|..||.||
plant   207 PRYGNIEARIIGK----------YMTQLKHLEIRYSTL--------TARGLDSVCKGCSNLEYMD 253

  Fly   521 LEECSQITDLTLAHLATGCPSLEKLTLSHCELITDD 556
            |..|   ..||.:.:.|....|:.||    |:|..|
plant   254 LRGC---ISLTRSDINTNTSGLKNLT----EIIKPD 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 13/55 (24%)
leucine-rich repeat 280..307 CDD:275381 6/44 (14%)
AMN1 <308..453 CDD:187754 31/144 (22%)
leucine-rich repeat 308..327 CDD:275381 4/18 (22%)
leucine-rich repeat 334..359 CDD:275381 7/24 (29%)
leucine-rich repeat 360..385 CDD:275381 3/24 (13%)
leucine-rich repeat 386..411 CDD:275381 7/24 (29%)
AMN1 <409..586 CDD:187754 32/153 (21%)
leucine-rich repeat 412..437 CDD:275381 4/24 (17%)
leucine-rich repeat 438..463 CDD:275381 2/26 (8%)
leucine-rich repeat 464..515 CDD:275381 9/53 (17%)
leucine-rich repeat 516..541 CDD:275381 9/24 (38%)
leucine-rich repeat 542..561 CDD:275381 6/15 (40%)
leucine-rich repeat 571..595 CDD:275381
leucine-rich repeat 596..621 CDD:275381
AT4G30640NP_567849.1 AMN1 <101..>179 CDD:187754 28/114 (25%)
leucine-rich repeat 103..125 CDD:275381 6/24 (25%)
leucine-rich repeat 126..151 CDD:275381 10/50 (20%)
leucine-rich repeat 152..177 CDD:275381 7/24 (29%)
leucine-rich repeat 178..223 CDD:275381 8/74 (11%)
leucine-rich repeat 224..248 CDD:275381 7/31 (23%)
leucine-rich repeat 249..274 CDD:275381 10/27 (37%)
Blue background indicates that the domain is not in the aligned region.

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