DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and fbxl17

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_073766094.1 Gene:fbxl17 / 795023 ZFINID:ZDB-GENE-111013-3 Length:600 Species:Danio rerio


Alignment Length:425 Identity:116/425 - (27%)
Similarity:197/425 - (46%) Gaps:55/425 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 PVINPLPAVSINPKIMESSSDSCSLSSSTTPDVGLADQQRNMAGSAQDQSE------DQSQTFLG 231
            |.|.|||           ||.|.|.||::..|...|.:..:..|:....|.      :.|:....
Zfish   159 PSICPLP-----------SSSSSSSSSASEEDGATAGRHSDPGGATTCSSSSCCCQTEASEEIKS 212

  Fly   232 ATELDDELIKQLPKEVLLRVFSYLDVVSLCRCAQ-VCKYWNVLALDGSSWQKINLFDFQRDIEGP 295
            ....|...|.|||..:||:|||:|.|...|..|. |||||..|.||...|::|:|...|: ::..
Zfish   213 TENTDTSHINQLPSSILLKVFSHLSVKERCLAASLVCKYWRDLCLDFQFWKQIDLSGLQQ-VKDD 276

  Fly   296 VIENISQRCRGFLKSLSLRGCQSVGDQSVRTLANHCHNIEHLDLSDCKKITDISTQSISRYCSKL 360
            ::..|:.| |..:..:::..|::|.|..|..||::|..:.......||:::|:|..:::.:|..|
Zfish   277 LLVKIASR-RQNVTEINISDCRNVQDHGVCALASNCAGLIKYTAYRCKQLSDVSLSTVAIHCPLL 340

  Fly   361 TAINLHSCSNITDNSLKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGCKQIND 425
            ..:::.:...:||::||.|.|.|..|.:::...|:.||:.|:.:||:||.||::...:..|.:.|
Zfish   341 QKVHVGNQDKLTDHALKLLGDHCKELKDVHFGQCYSISDEGLMSLAQGCNKLQRIYMQENKLVTD 405

  Fly   426 NAIMCLAKYCPDLMVLNLHSCETITDSSIRQLAANCHKLQKL------------------CVSKC 472
            .::...|::||||..:....| ::|...:..|.    :||.|                  .|.||
Zfish   406 RSVQAFAEHCPDLQFVGFMGC-SVTSQGVIHLT----RLQHLSSLDLRHISELNNETVMEVVRKC 465

  Fly   473 ADLTDLTLL-----------SLSQHNHLLNTLEVSGCRNFTDIGFQALGRNCKYLERMDLEECSQ 526
            .:||.|.|.           .:::....|..|.:..|: .||....|:|:....:|.:|...|.:
Zfish   466 RNLTSLNLCLNWTINDRCVEIIAKEGRSLKELYLVSCK-ITDHALIAIGQYSSTIETVDAGWCKE 529

  Fly   527 ITDLTLAHLATGCPSLEKLTLSHCELITDDGIRHL 561
            |||.....:|....||..|.|..|:.:.::.:..|
Zfish   530 ITDQGATQIAKSSKSLRYLGLMRCDKVNEETVERL 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 21/44 (48%)
leucine-rich repeat 280..307 CDD:275381 7/26 (27%)
AMN1 <308..453 CDD:187754 40/144 (28%)
leucine-rich repeat 308..327 CDD:275381 4/18 (22%)
leucine-rich repeat 334..359 CDD:275381 5/24 (21%)
leucine-rich repeat 360..385 CDD:275381 8/24 (33%)
leucine-rich repeat 386..411 CDD:275381 9/24 (38%)
AMN1 <409..586 CDD:187754 43/182 (24%)
leucine-rich repeat 412..437 CDD:275381 5/24 (21%)
leucine-rich repeat 438..463 CDD:275381 4/24 (17%)
leucine-rich repeat 464..515 CDD:275381 17/79 (22%)
leucine-rich repeat 516..541 CDD:275381 7/24 (29%)
leucine-rich repeat 542..561 CDD:275381 4/18 (22%)
leucine-rich repeat 571..595 CDD:275381
leucine-rich repeat 596..621 CDD:275381
fbxl17XP_073766094.1 None
Blue background indicates that the domain is not in the aligned region.

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