DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and Fbxl22

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_780415.1 Gene:Fbxl22 / 74165 MGIID:1921415 Length:236 Species:Mus musculus


Alignment Length:235 Identity:56/235 - (23%)
Similarity:96/235 - (40%) Gaps:46/235 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 STQSISRYCSKL----------TAINLHSCSNITDNSLKYLSDGCPNLMEINVSW-CHLISENGV 402
            |.:|:||.||:|          ..::.||.:.:..::.: ||   |.|..:::.| ...:....:
Mouse    22 SRRSLSRTCSQLRDVFEDPTLWPLLHFHSLAELKKDNFR-LS---PALRSLSICWHSSRVQVCSI 82

  Fly   403 EALARGCVKLRKFSSKGCKQINDNAIMCLAKYCPDLMVLNLHSCETITDSSIRQLAANCHKLQKL 467
            |...:..:: |...|:....:|| .::.:...||:|..:.|..|..:||..:.:|..:|.:|:.|
Mouse    83 EDWLKSALQ-RSICSQHESLVND-FLLQVCNRCPNLTSVTLSGCGHVTDDCLARLLLSCPRLRTL 145

  Fly   468 CVSKCADLTDLTLLSLSQHNHLLNTLEVSGCRNFTDIGFQALGRNCKYLERMDLEECSQITDLTL 532
            .:..||.:|:.||.:::.|...|.||.|..|||.:..|                          |
Mouse   146 RLENCARVTNRTLAAVAAHGRALQTLHVDFCRNVSAAG--------------------------L 184

  Fly   533 AHLATGCPSLEKLTLSHCELITDDGIRHLTTGSCAAEILS 572
            ..|...||:|.........:|.|...|   ...|||...|
Mouse   185 LRLRAACPNLRLSAERSAAMIPDQPPR---ARVCAASAFS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887
leucine-rich repeat 280..307 CDD:275381
AMN1 <308..453 CDD:187754 26/114 (23%)
leucine-rich repeat 308..327 CDD:275381
leucine-rich repeat 334..359 CDD:275381 5/9 (56%)
leucine-rich repeat 360..385 CDD:275381 5/34 (15%)
leucine-rich repeat 386..411 CDD:275381 3/25 (12%)
AMN1 <409..586 CDD:187754 41/164 (25%)
leucine-rich repeat 412..437 CDD:275381 5/24 (21%)
leucine-rich repeat 438..463 CDD:275381 7/24 (29%)
leucine-rich repeat 464..515 CDD:275381 16/50 (32%)
leucine-rich repeat 516..541 CDD:275381 3/24 (13%)
leucine-rich repeat 542..561 CDD:275381 4/18 (22%)
leucine-rich repeat 571..595 CDD:275381 1/2 (50%)
leucine-rich repeat 596..621 CDD:275381
Fbxl22NP_780415.1 F-box_FBXL22 3..45 CDD:438901 7/22 (32%)
LRR 1 15..40 7/17 (41%)
LRR 2 43..72 6/32 (19%)
AMN1 45..>200 CDD:187754 42/186 (23%)
LRR 3 98..123 6/25 (24%)
leucine-rich repeat 116..141 CDD:275381 7/24 (29%)
LRR 4 124..149 7/24 (29%)
leucine-rich repeat 142..167 CDD:275381 8/24 (33%)
LRR 5 150..175 10/24 (42%)
leucine-rich repeat 168..193 CDD:275381 11/50 (22%)
LRR 6 176..201 9/50 (18%)
Blue background indicates that the domain is not in the aligned region.

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