DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and Fbxl20

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_006534361.1 Gene:Fbxl20 / 72194 MGIID:1919444 Length:438 Species:Mus musculus


Alignment Length:417 Identity:245/417 - (58%)
Similarity:313/417 - (75%) Gaps:2/417 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 DELI--KQLPKEVLLRVFSYLDVVSLCRCAQVCKYWNVLALDGSSWQKINLFDFQRDIEGPVIEN 299
            ||.:  |:||||:|||:||:||||:|||||||.:.|||||||||:||:|:||||||||||.|:||
Mouse    22 DEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVEN 86

  Fly   300 ISQRCRGFLKSLSLRGCQSVGDQSVRTLANHCHNIEHLDLSDCKKITDISTQSISRYCSKLTAIN 364
            ||:||.|||:.||||||..|||.::||.|.:|.|||.|.|:.|.|.||.:..|:|::||||..::
Mouse    87 ISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLD 151

  Fly   365 LHSCSNITDNSLKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGCKQINDNAIM 429
            |.||::||:.|||.||:|||.|.::|:|||..::::|::||.|||..|:....|||.|:.|.|:.
Mouse   152 LASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALK 216

  Fly   430 CLAKYCPDLMVLNLHSCETITDSSIRQLAANCHKLQKLCVSKCADLTDLTLLSLSQHNHLLNTLE 494
            .:..:||:|:.|||.:|..|||..:..:...|||||.||.|.|:::||..|.:|.|:...|..||
Mouse   217 YIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILE 281

  Fly   495 VSGCRNFTDIGFQALGRNCKYLERMDLEECSQITDLTLAHLATGCPSLEKLTLSHCELITDDGIR 559
            |:.|...||:||..|.|||..||:||||||.||||.||..|:..||.|:.|:|||||||||||||
Mouse   282 VARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIR 346

  Fly   560 HLTTGSCAAEILSVLELDNCPLITDRTLEHLVSCHNLQRIELFDCQLITRTAIRKLKNHLPNIKV 624
            ||..|:||.:.|.|:||||||||||.:||||.|||:|:||||:|||.|||..|::|:.|||||||
Mouse   347 HLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKV 411

  Fly   625 HAYFAPGTPPAVTSGHRPRYCRCCEIL 651
            ||||||.|||....|.|.|:||||.||
Mouse   412 HAYFAPVTPPPSVGGSRQRFCRCCIIL 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 32/45 (71%)
leucine-rich repeat 280..307 CDD:275381 20/26 (77%)
AMN1 <308..453 CDD:187754 70/144 (49%)
leucine-rich repeat 308..327 CDD:275381 11/18 (61%)
leucine-rich repeat 334..359 CDD:275381 11/24 (46%)
leucine-rich repeat 360..385 CDD:275381 13/24 (54%)
leucine-rich repeat 386..411 CDD:275381 11/24 (46%)
AMN1 <409..586 CDD:187754 94/176 (53%)
leucine-rich repeat 412..437 CDD:275381 8/24 (33%)
leucine-rich repeat 438..463 CDD:275381 9/24 (38%)
leucine-rich repeat 464..515 CDD:275381 24/50 (48%)
leucine-rich repeat 516..541 CDD:275381 16/24 (67%)
leucine-rich repeat 542..561 CDD:275381 15/18 (83%)
leucine-rich repeat 571..595 CDD:275381 18/23 (78%)
leucine-rich repeat 596..621 CDD:275381 15/24 (63%)
Fbxl20XP_006534361.1 F-box_FBXL2-like 24..68 CDD:438887 30/43 (70%)
leucine-rich repeat 67..94 CDD:275381 20/26 (77%)
AMN1 95..291 CDD:187754 90/195 (46%)
leucine-rich repeat 95..114 CDD:275381 11/18 (61%)
leucine-rich repeat 121..146 CDD:275381 11/24 (46%)
leucine-rich repeat 147..172 CDD:275381 13/24 (54%)
leucine-rich repeat 173..198 CDD:275381 11/24 (46%)
leucine-rich repeat 199..224 CDD:275381 8/24 (33%)
AMN1 222..396 CDD:187754 102/173 (59%)
leucine-rich repeat 225..250 CDD:275381 9/24 (38%)
leucine-rich repeat 251..276 CDD:275381 11/24 (46%)
leucine-rich repeat 277..302 CDD:275381 13/24 (54%)
leucine-rich repeat 303..328 CDD:275381 16/24 (67%)
leucine-rich repeat 329..357 CDD:275381 20/27 (74%)
leucine-rich repeat 358..382 CDD:275381 18/23 (78%)
leucine-rich repeat 383..408 CDD:275381 15/24 (63%)

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