DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9003 and Fbxl2

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_848739.1 Gene:Fbxl2 / 72179 MGIID:1919429 Length:423 Species:Mus musculus


Alignment Length:417 Identity:228/417 - (54%)
Similarity:307/417 - (73%) Gaps:1/417 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 DDELI-KQLPKEVLLRVFSYLDVVSLCRCAQVCKYWNVLALDGSSWQKINLFDFQRDIEGPVIEN 299
            ||.|| |:||||:|||:||:||:|:||||||:.|.||:||||||:||:::||:||.|:||.|:||
Mouse     7 DDGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRVDLFNFQTDVEGRVVEN 71

  Fly   300 ISQRCRGFLKSLSLRGCQSVGDQSVRTLANHCHNIEHLDLSDCKKITDISTQSISRYCSKLTAIN 364
            ||:||.|||:.||||||..|||.|::|.|.:|.|||||:|:.|.||||.:..|:||:||||..::
Mouse    72 ISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLD 136

  Fly   365 LHSCSNITDNSLKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGCKQINDNAIM 429
            |.||.::|::|||.:|:||.||..:|:|||..|::.|:|||.|||..|:....:||.|:.|.|:.
Mouse   137 LTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALK 201

  Fly   430 CLAKYCPDLMVLNLHSCETITDSSIRQLAANCHKLQKLCVSKCADLTDLTLLSLSQHNHLLNTLE 494
            .:..:|.:|:.|||.||..|||..:.|:...||:||.||:|.|::|||.:|.:|..:...|..||
Mouse   202 HIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLE 266

  Fly   495 VSGCRNFTDIGFQALGRNCKYLERMDLEECSQITDLTLAHLATGCPSLEKLTLSHCELITDDGIR 559
            .:.|.:.||.||..|.|||..||:||||||..|||.||..|:..||.|:.|:|||||||||:||.
Mouse   267 AARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSLSHCELITDEGIL 331

  Fly   560 HLTTGSCAAEILSVLELDNCPLITDRTLEHLVSCHNLQRIELFDCQLITRTAIRKLKNHLPNIKV 624
            ||::.:|..|.|.|||||||.|:||.:||||.:|..|:|:||:|||.:||..|::::..||::||
Mouse   332 HLSSSTCGHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 396

  Fly   625 HAYFAPGTPPAVTSGHRPRYCRCCEIL 651
            ||||||.|||...:|...|.||||.||
Mouse   397 HAYFAPVTPPPAVAGSGHRLCRCCVIL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 31/44 (70%)
leucine-rich repeat 280..307 CDD:275381 16/26 (62%)
AMN1 <308..453 CDD:187754 72/144 (50%)
leucine-rich repeat 308..327 CDD:275381 11/18 (61%)
leucine-rich repeat 334..359 CDD:275381 14/24 (58%)
leucine-rich repeat 360..385 CDD:275381 11/24 (46%)
leucine-rich repeat 386..411 CDD:275381 13/24 (54%)
AMN1 <409..586 CDD:187754 87/176 (49%)
leucine-rich repeat 412..437 CDD:275381 7/24 (29%)
leucine-rich repeat 438..463 CDD:275381 11/24 (46%)
leucine-rich repeat 464..515 CDD:275381 23/50 (46%)
leucine-rich repeat 516..541 CDD:275381 15/24 (63%)
leucine-rich repeat 542..561 CDD:275381 13/18 (72%)
leucine-rich repeat 571..595 CDD:275381 16/23 (70%)
leucine-rich repeat 596..621 CDD:275381 11/24 (46%)
Fbxl2NP_848739.1 F-box_FBXL2-like 9..53 CDD:438887 30/43 (70%)
leucine-rich repeat 52..79 CDD:275381 16/26 (62%)
LRR 1 61..87 17/25 (68%)
AMN1 <76..223 CDD:187754 73/146 (50%)
leucine-rich repeat 80..99 CDD:275381 11/18 (61%)
Interaction with Calmodulin. /evidence=ECO:0000269|PubMed:21343341 80..90 7/9 (78%)
LRR 2 88..113 14/24 (58%)
leucine-rich repeat 106..131 CDD:275381 14/24 (58%)
LRR 3 114..139 13/24 (54%)
leucine-rich repeat 132..157 CDD:275381 11/24 (46%)
LRR 4 140..165 11/24 (46%)
leucine-rich repeat 158..183 CDD:275381 13/24 (54%)
LRR 5 166..191 10/24 (42%)
AMN1 168..367 CDD:187754 99/198 (50%)
leucine-rich repeat 184..209 CDD:275381 7/24 (29%)
LRR 6 192..217 9/24 (38%)
leucine-rich repeat 210..235 CDD:275381 11/24 (46%)
LRR 7 218..243 11/24 (46%)
leucine-rich repeat 236..261 CDD:275381 11/24 (46%)
LRR 8 244..269 9/24 (38%)
leucine-rich repeat 262..287 CDD:275381 12/24 (50%)
LRR 9 270..295 14/24 (58%)
leucine-rich repeat 288..313 CDD:275381 15/24 (63%)
LRR 10 296..321 12/24 (50%)
leucine-rich repeat 314..336 CDD:275381 15/21 (71%)
LRR 11 322..350 17/27 (63%)
leucine-rich repeat 343..362 CDD:275381 13/18 (72%)
LRR 12 351..375 13/23 (57%)
LRR 13 376..401 12/24 (50%)
CAAX motif 420..423 1/2 (50%)

Return to query results.
Submit another query.