DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and Fbxl17

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_056609.1 Gene:Fbxl17 / 50758 MGIID:1354704 Length:701 Species:Mus musculus


Alignment Length:448 Identity:101/448 - (22%)
Similarity:192/448 - (42%) Gaps:90/448 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 PVINPLPAVSINPKIMESSSDSCSLSSSTTPDVGLADQQRNMAGSAQDQSEDQSQTFLG------ 231
            |.:.|.||               |.:|...|.|..|.......|:|...::.|.::  |      
Mouse   255 PPLCPAPA---------------SPASECAPIVAAAGDTVRAGGTAPSSAQQQPES--GDADCQE 302

  Fly   232 ------------ATELDDELIKQLPKEVLLRVFSYLDVVSLCRCAQ-VCKYWNVLALDGSSWQKI 283
                        ..|:.|  |.|||..:||::||.|.:...|..|. |||||..|.||...|:::
Mouse   303 PPENPCDCHREPPPEIPD--INQLPPSILLKIFSNLSLNERCLSASLVCKYWRDLCLDFQFWKQL 365

  Fly   284 NLFDFQRDIEGPVIENISQRCRGFLKSLSLRGCQSVGDQSVRTLANHCHNIEHLDLSDCKKITDI 348
            :|...|: :...::|.|:.|.:..:: :::..|:|:.|..|..||..|..:.......||:::|.
Mouse   366 DLSSRQQ-VTDELLEKIASRSQNIIE-INISDCRSLSDSGVCVLAFKCPGLLRYTAYRCKQLSDT 428

  Fly   349 STQSISRYCSKLTAINLHSCSNITDNSLKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLR 413
            |..:::.:|..|..:::.:...:||..||.|...|..|.:|:...|:.||:.|:..:|:.|:||:
Mouse   429 SIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSRCRELKDIHFGQCYKISDEGMIVIAKSCLKLQ 493

  Fly   414 KFSSKGCKQINDNAIMCLAKYCPDLMVLNLHSCET------------------------ITDSSI 454
            :...:..|.:.|.::...|::||:|..:....|..                        :.:.::
Mouse   494 RIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETV 558

  Fly   455 RQLAANCHKLQ--KLCVS-----KCAD------------------LTDLTLLSLSQHNHLLNTLE 494
            .::...|..|.  .||::     :|.:                  :||..|:::.:::..:.|::
Mouse   559 MEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSVTIETVD 623

  Fly   495 VSGCRNFTDIGFQALGRNCKYLERMDLEECSQITDLTLAHLATGCPSLEKLT-LSHCE 551
            |..|:..||.|...:.::.|.|..:.|..|.::.:||:..|....|.:...| |..|:
Mouse   624 VGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNELTVEQLVQQYPHITFSTVLQDCK 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 20/44 (45%)
leucine-rich repeat 280..307 CDD:275381 6/26 (23%)
AMN1 <308..453 CDD:187754 36/168 (21%)
leucine-rich repeat 308..327 CDD:275381 4/18 (22%)
leucine-rich repeat 334..359 CDD:275381 5/24 (21%)
leucine-rich repeat 360..385 CDD:275381 7/24 (29%)
leucine-rich repeat 386..411 CDD:275381 8/24 (33%)
AMN1 <409..586 CDD:187754 35/193 (18%)
leucine-rich repeat 412..437 CDD:275381 5/24 (21%)
leucine-rich repeat 438..463 CDD:275381 3/48 (6%)
leucine-rich repeat 464..515 CDD:275381 13/75 (17%)
leucine-rich repeat 516..541 CDD:275381 6/24 (25%)
leucine-rich repeat 542..561 CDD:275381 3/11 (27%)
leucine-rich repeat 571..595 CDD:275381
leucine-rich repeat 596..621 CDD:275381
Fbxl17NP_056609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..93
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..250
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..321 6/45 (13%)
F-box_FBXO13 320..368 CDD:438864 21/49 (43%)
leucine-rich repeat 362..387 CDD:275381 6/25 (24%)
leucine-rich repeat 388..413 CDD:275381 7/25 (28%)
AMN1 411..573 CDD:187754 32/161 (20%)
leucine-rich repeat 414..439 CDD:275381 5/24 (21%)
leucine-rich repeat 440..465 CDD:275381 7/24 (29%)
leucine-rich repeat 466..491 CDD:275381 8/24 (33%)
leucine-rich repeat 492..517 CDD:275381 5/24 (21%)
leucine-rich repeat 545..567 CDD:275381 1/21 (5%)
leucine-rich repeat 568..593 CDD:275381 4/24 (17%)
leucine-rich repeat 594..618 CDD:275381 3/23 (13%)
leucine-rich repeat 619..644 CDD:275381 6/24 (25%)
leucine-rich repeat 645..670 CDD:275381 6/24 (25%)
Blue background indicates that the domain is not in the aligned region.

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