DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and fbxl15

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001011123.1 Gene:fbxl15 / 496536 XenbaseID:XB-GENE-973058 Length:292 Species:Xenopus tropicalis


Alignment Length:297 Identity:70/297 - (23%)
Similarity:132/297 - (44%) Gaps:55/297 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 DGSSWQKINLFDFQ-RDIEGPVIENISQRCRGFLKSLSLRGCQSVGDQSVRTLANHCHNIEHLDL 339
            |.||   ::|.|.. .|:..|.|          |::|.||..     .|::.::....::.||.|
 Frog     6 DNSS---VHLLDLPWEDVLVPHI----------LRNLPLRHI-----LSLQRVSKPFQSLVHLYL 52

  Fly   340 SDCKKI--TDISTQ-------SISRYCSKLTAINLHSCSN-ITDNSLKYLSDGCPNLMEINVSWC 394
            ::|:..  |.:.:|       .:.|..:.|..::|.||.: :||..|..:.....:|:.||::  
 Frog    53 ANCRHFDSTQLGSQLPKSTFSELLRNNTVLQKLDLQSCCDWLTDKELLPVIGQNHHLIHINLN-- 115

  Fly   395 HLISENGVEALARGCVKLRKFSSKGCKQINDNAIMCLAKYCPDLMVLNLHSCETITDSSIRQLAA 459
                                    .|.|:...:::.::..||.|..:.|..||.:...|:|.|..
 Frog   116 ------------------------SCGQLTRQSLVAISLSCPHLQNICLGHCEWVDCLSLRSLVD 156

  Fly   460 NCHKLQKLCVSKCADLTDLTLLSLSQHNHLLNTLEVSGCRNFTDIGFQALGRNCKYLERMDLEEC 524
            :|..|:.:.::.|..|.|.|:..|.|.:..|.:|.::...|.:||..:...:||:.||.:||..|
 Frog   157 HCKCLEAIDLTACRQLKDDTISYLVQKSTRLKSLSLAVNANISDIAVEETAKNCRDLEHLDLTGC 221

  Fly   525 SQITDLTLAHLATGCPSLEKLTLSHCELITDDGIRHL 561
            .::.:.::..||..|..|:.|.:.||..:|:..:.:|
 Frog   222 LRVKNDSIRTLAEYCTKLKSLKVKHCHNVTESSLGNL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 3/4 (75%)
leucine-rich repeat 280..307 CDD:275381 5/27 (19%)
AMN1 <308..453 CDD:187754 30/154 (19%)
leucine-rich repeat 308..327 CDD:275381 5/18 (28%)
leucine-rich repeat 334..359 CDD:275381 7/33 (21%)
leucine-rich repeat 360..385 CDD:275381 7/25 (28%)
leucine-rich repeat 386..411 CDD:275381 3/24 (13%)
AMN1 <409..586 CDD:187754 40/153 (26%)
leucine-rich repeat 412..437 CDD:275381 3/24 (13%)
leucine-rich repeat 438..463 CDD:275381 8/24 (33%)
leucine-rich repeat 464..515 CDD:275381 14/50 (28%)
leucine-rich repeat 516..541 CDD:275381 8/24 (33%)
leucine-rich repeat 542..561 CDD:275381 5/18 (28%)
leucine-rich repeat 571..595 CDD:275381
leucine-rich repeat 596..621 CDD:275381
fbxl15NP_001011123.1 F-box_FBXL15 12..55 CDD:438898 13/57 (23%)
leucine-rich repeat 47..81 CDD:275381 7/33 (21%)
AMN1 65..251 CDD:187754 50/211 (24%)
leucine-rich repeat 82..108 CDD:275381 7/25 (28%)
leucine-rich repeat 109..134 CDD:275381 6/50 (12%)
LRR 1 134..155 6/20 (30%)
leucine-rich repeat 135..160 CDD:275381 8/24 (33%)
LRR 2 160..181 5/20 (25%)
leucine-rich repeat 161..186 CDD:275381 7/24 (29%)
LRR 3 186..207 5/20 (25%)
leucine-rich repeat 187..212 CDD:275381 7/24 (29%)
LRR 4 212..233 5/20 (25%)
leucine-rich repeat 213..238 CDD:275381 8/24 (33%)
LRR 5 238..259 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

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