DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and CG32085

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster


Alignment Length:757 Identity:170/757 - (22%)
Similarity:268/757 - (35%) Gaps:237/757 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASSAETGVMEVGGTSGT----GTGSSSSNNGGGSSSNSGGAG------GSIELLCPPSGSSSI-- 55
            :|.:..||:|......:    |.|..|.::...:||.:||||      |:......|||.:|:  
  Fly     2 SSISAQGVVERASAELSKRINGLGLRSKHHHSSTSSGAGGAGDAASPAGATPTPAAPSGKTSVME 66

  Fly    56 ------SGSASFSSNSGASGSSSQTHSTAVSSATDRSNNNGNNHNPSLQLNGN----------GG 104
                  .|..:.:||||::.|:|.|.|.:.::||..::|......|.....|:          ||
  Fly    67 RVTNALCGGGNSNSNSGSNSSNSNTSSASATAATSPASNANPPQTPDKPSRGSSPSPGGITMPGG 131

  Fly   105 SNTRQHSSGSNSRQHSSSSSNSNSSNISPPPSSSSS---SRSNNNNNNHSSNIISGFCSTIWRSA 166
            .:..|     ||..|..........::....|....   ..|...|:||...:            
  Fly   132 QSQVQ-----NSTHHLLQQQQQQQQHMQLQQSQQQHLQLQASTLINSNHHVMV------------ 179

  Fly   167 TFGSATPVINPL-------------------PAVSINPKIMESSSDSCSLSSSTTPDVGLADQQR 212
              |.|.|...||                   |...:||            .|.|...:|:...|:
  Fly   180 --GPAPPTGMPLGAPPTPTVKSIAKQMNITIPGGGVNP------------GSPTFSTMGMVAAQK 230

  Fly   213 NMAGSAQDQSEDQSQTFLGATELDDELIKQLPK-------------------------------- 245
            ..|.:             |.|.|  :|.||||.                                
  Fly   231 AAASA-------------GGTPL--QLRKQLPNPHLHHPYGSMGINAASPLIMQHQLHPPPIHSI 280

  Fly   246 -------EVLLRVFSYLDVVSLCRCAQVC-----------KYWNVLALDGSSWQKINLFDFQRDI 292
                   ..|.|.|.|.........||||           :||:.|.   .:.|...|.......
  Fly   281 EQLMLDDRFLSRFFQYFSPYERRILAQVCIKWRDTLYRSPRYWSGLL---PTLQCRELRQMPGCD 342

  Fly   293 EGPVIENISQRCRGF--------------------------LKSLSLRGCQSVGDQSVRTLANHC 331
            .|.:..::.:  |||                          :.||||| |.|:.|:.:.||.:|.
  Fly   343 RGKLYNSLIR--RGFHALGLVGASDEDALDVVHSFPLASKHVHSLSLR-CSSISDRGLETLLDHL 404

  Fly   332 HNIEHLDLSDCKKITDISTQSISRYC--SKLTAINLHSCSNITDNSLKYLSDGCPNLMEINVSWC 394
            .::..|:|:.|.::|:....:    |  .::.:::|..|.||.|.::..::...|:|.|.::...
  Fly   405 QSLFELELAGCNEVTEAGLWA----CLTPRIVSLSLADCINIADEAVGAVAQLLPSLYEFSLQAY 465

  Fly   395 HLISENGVEALARGCVKLRKFSSK-----------GCKQINDNAIMCLAKYCPDLMVLNLHSCET 448
            |:..           ..|..||.|           .|.::.::.|:.:....|.|.||:|..|..
  Fly   466 HVTD-----------AALGYFSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCSK 519

  Fly   449 ITDSSIRQLAANCHKLQKLCVSKCADLTDLTLLSLSQHNHLLNTLEVSGCRNFTDIGFQALGRNC 513
            :||..:..:|.|..||:.|.:|.|..:||.             :||...|             :.
  Fly   520 LTDDGVELIAENLQKLRALDLSWCPRITDA-------------SLEYIAC-------------DL 558

  Fly   514 KYLERMDLEECSQITDLTLAHLATGCPSLEKLTLSHCELITDDGIRHLTTGSCAAEILSVLELDN 578
            ..||.:.|:.|..|||:.:.:::| ..||..|.|..|..:.|.|::||    |:...|.||.|..
  Fly   559 NQLEELTLDRCVHITDIGVGYIST-MLSLTALFLRWCSQVRDFGLQHL----CSMRNLQVLSLAG 618

  Fly   579 CPLITDRTLEHLVSCHNLQRIELFDCQLITRTAIRKLKNHLP 620
            |||:|...|..|:...:||.:||.:|...:......||.|||
  Fly   619 CPLLTSSGLSSLIQLRHLQELELTNCPGASHELFDYLKEHLP 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 16/93 (17%)
leucine-rich repeat 280..307 CDD:275381 4/26 (15%)
AMN1 <308..453 CDD:187754 39/157 (25%)
leucine-rich repeat 308..327 CDD:275381 8/18 (44%)
leucine-rich repeat 334..359 CDD:275381 5/26 (19%)
leucine-rich repeat 360..385 CDD:275381 5/24 (21%)
leucine-rich repeat 386..411 CDD:275381 3/24 (13%)
AMN1 <409..586 CDD:187754 52/187 (28%)
leucine-rich repeat 412..437 CDD:275381 6/35 (17%)
leucine-rich repeat 438..463 CDD:275381 9/24 (38%)
leucine-rich repeat 464..515 CDD:275381 9/50 (18%)
leucine-rich repeat 516..541 CDD:275381 8/24 (33%)
leucine-rich repeat 542..561 CDD:275381 6/18 (33%)
leucine-rich repeat 571..595 CDD:275381 10/23 (43%)
leucine-rich repeat 596..621 CDD:275381 10/25 (40%)
CG32085NP_729732.1 F-box_FBXL16 283..325 CDD:438899 10/41 (24%)
leucine-rich repeat 382..406 CDD:275381 11/24 (46%)
AMN1 383..600 CDD:187754 64/259 (25%)
leucine-rich repeat 431..456 CDD:275381 5/24 (21%)
leucine-rich repeat 457..482 CDD:275381 7/35 (20%)
leucine-rich repeat 483..508 CDD:275381 2/24 (8%)
leucine-rich repeat 509..534 CDD:275381 9/24 (38%)
leucine-rich repeat 535..560 CDD:275381 9/50 (18%)
leucine-rich repeat 561..585 CDD:275381 8/24 (33%)
leucine-rich repeat 586..610 CDD:275381 9/27 (33%)
leucine-rich repeat 636..661 CDD:275381 10/25 (40%)

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