DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and fbxl2

DIOPT Version :9

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_956400.1 Gene:fbxl2 / 378737 ZFINID:ZDB-GENE-030925-12 Length:432 Species:Danio rerio


Alignment Length:418 Identity:238/418 - (56%)
Similarity:308/418 - (73%) Gaps:2/418 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 DDE--LIKQLPKEVLLRVFSYLDVVSLCRCAQVCKYWNVLALDGSSWQKINLFDFQRDIEGPVIE 298
            :||  :.|:||||:|||:|||||||:|||||||.|.|||||||||:||||:||:||.||||.|:|
Zfish    15 NDEAPINKKLPKELLLRIFSYLDVVTLCRCAQVSKAWNVLALDGSNWQKIDLFNFQTDIEGRVVE 79

  Fly   299 NISQRCRGFLKSLSLRGCQSVGDQSVRTLANHCHNIEHLDLSDCKKITDISTQSISRYCSKLTAI 363
            |||:||.|||:.||||||.||||.|::|.|.:|.|||||:|:.|.||||.:..|:|::|.||..:
Zfish    80 NISKRCGGFLRQLSLRGCLSVGDASMKTFAQNCRNIEHLNLNGCTKITDSTCISLSKFCFKLRHL 144

  Fly   364 NLHSCSNITDNSLKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGCKQINDNAI 428
            :|.||.:||:::||.||:||..|..:|:|||..|:.:|:|||:|||..||....:||.|::|.|:
Zfish   145 DLTSCVSITNHALKALSEGCRMLENLNLSWCDQITSDGIEALSRGCTALRALFLRGCTQLDDTAL 209

  Fly   429 MCLAKYCPDLMVLNLHSCETITDSSIRQLAANCHKLQKLCVSKCADLTDLTLLSLSQHNHLLNTL 493
            ..|.|:||:||.:|:.||..|||.....|...|||||.:|:|.|:::||.:|.:|..:...|..|
Zfish   210 KHLQKHCPELMTINMQSCTQITDDGFVSLCRGCHKLQMVCISGCSNITDASLTALGLNCQRLKIL 274

  Fly   494 EVSGCRNFTDIGFQALGRNCKYLERMDLEECSQITDLTLAHLATGCPSLEKLTLSHCELITDDGI 558
            |.:.|.:.||.||..|.|||..:|:||||||..:||.||..|:..||.|:.|:||||||||||||
Zfish   275 EAARCSHVTDAGFTVLARNCHEMEKMDLEECILVTDNTLVQLSIHCPRLQALSLSHCELITDDGI 339

  Fly   559 RHLTTGSCAAEILSVLELDNCPLITDRTLEHLVSCHNLQRIELFDCQLITRTAIRKLKNHLPNIK 623
            |||::..|..|.|.|:||||||||||.|||||.:|..|:||||:|||.::|..|::::.|||.||
Zfish   340 RHLSSSVCGQERLQVVELDNCPLITDITLEHLKNCQRLERIELYDCQQVSRAGIKRIRAHLPEIK 404

  Fly   624 VHAYFAPGTPPAVTSGHRPRYCRCCEIL 651
            |||||||.|||....|...|.||||.||
Zfish   405 VHAYFAPVTPPPSVHGGGQRLCRCCVIL 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box-like 240..285 CDD:289689 36/44 (82%)
leucine-rich repeat 280..307 CDD:275381 19/26 (73%)
AMN1 <308..453 CDD:187754 74/144 (51%)
leucine-rich repeat 308..327 CDD:275381 12/18 (67%)
leucine-rich repeat 334..359 CDD:275381 13/24 (54%)
leucine-rich repeat 360..385 CDD:275381 12/24 (50%)
leucine-rich repeat 386..411 CDD:275381 13/24 (54%)
AMN1 <409..586 CDD:187754 90/176 (51%)
leucine-rich repeat 412..437 CDD:275381 10/24 (42%)
leucine-rich repeat 438..463 CDD:275381 10/24 (42%)
leucine-rich repeat 464..515 CDD:275381 21/50 (42%)
leucine-rich repeat 516..541 CDD:275381 13/24 (54%)
leucine-rich repeat 542..561 CDD:275381 15/18 (83%)
leucine-rich repeat 571..595 CDD:275381 18/23 (78%)
leucine-rich repeat 596..621 CDD:275381 12/24 (50%)
fbxl2NP_956400.1 F-box-like 24..66 CDD:289689 35/41 (85%)
leucine-rich repeat 61..88 CDD:275381 19/26 (73%)
AMN1 63..284 CDD:187754 110/220 (50%)
leucine-rich repeat 89..108 CDD:275381 12/18 (67%)
leucine-rich repeat 115..140 CDD:275381 13/24 (54%)
leucine-rich repeat 141..166 CDD:275381 12/24 (50%)
leucine-rich repeat 167..192 CDD:275381 13/24 (54%)
leucine-rich repeat 193..218 CDD:275381 10/24 (42%)
AMN1 212..390 CDD:187754 96/177 (54%)
leucine-rich repeat 219..244 CDD:275381 10/24 (42%)
leucine-rich repeat 245..270 CDD:275381 9/24 (38%)
leucine-rich repeat 271..296 CDD:275381 12/24 (50%)
leucine-rich repeat 297..322 CDD:275381 13/24 (54%)
leucine-rich repeat 323..351 CDD:275381 18/27 (67%)
leucine-rich repeat 352..376 CDD:275381 18/23 (78%)
leucine-rich repeat 377..402 CDD:275381 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588032
Domainoid 1 1.000 133 1.000 Domainoid score I5026
eggNOG 1 0.900 - - E1_KOG4341
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 515 1.000 Inparanoid score I1259
OMA 1 1.010 - - QHG52856
OrthoDB 1 1.010 - - D1046098at2759
OrthoFinder 1 1.000 - - FOG0002896
OrthoInspector 1 1.000 - - otm26570
orthoMCL 1 0.900 - - OOG6_101086
Panther 1 1.100 - - O PTHR13318
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2139
SonicParanoid 1 1.000 - - X1911
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.840

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