DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and fbxl3a

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001005773.3 Gene:fbxl3a / 378451 ZFINID:ZDB-GENE-030912-5 Length:431 Species:Danio rerio


Alignment Length:472 Identity:102/472 - (21%)
Similarity:168/472 - (35%) Gaps:163/472 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 KIMESSSDSC-----SLSSSTTPDVGLADQQRNMAGSAQDQSEDQSQTFLGATELDDELIKQLPK 245
            |..|.|:.||     |......|.....|.|.|..                          :||:
Zfish     7 KECEDSTSSCEGQTVSYKRPKQPSEDFGDLQSNWV--------------------------RLPQ 45

  Fly   246 EVLLRVFSYLDVVSLCRCAQVCKYWNVLALDGSSWQKINLFDFQRDIEGPVIENISQRCRGFLKS 310
            |:||.:|.||.::.....:|||..||........|:   .|:|:          ::|....:||:
Zfish    46 EILLHIFQYLPLLDRAFASQVCHNWNHAFHMPELWR---CFEFE----------LNQPATSYLKA 97

  Fly   311 LSLRGCQSVGDQSVRTLANHCHNIEHLDLSDCKKITDISTQSISRYCSKLTAINLHSCSNITDNS 375
                   :..|...:.:..|.::::::...     .|.||:|....|..|:  .|.:||..|   
Zfish    98 -------THPDLIKQIIKRHSNHLQYVSFK-----VDSSTESAETACDILS--QLVNCSLKT--- 145

  Fly   376 LKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGCKQINDNAI------MCLAKY 434
            |..:|...|:.||:..|  |.||     ||....|..:..||   .:|:|..:      :.:|..
Zfish   146 LGLISTARPSFMELPKS--HFIS-----ALTVVFVNSKSLSS---LKIDDTPVDDPSLKVLVANN 200

  Fly   435 CPDLMVLNLHSCETITDSSIRQLAANCHKLQKLCVSKCADLTDLTLLSLSQHNHL---------- 489
            ...|.:|.:.||..::.:.|..:|..||.|::|.::... |:|..||:||...|:          
Zfish   201 SDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHL-LSDELLLALSSEKHVHLEHLRIDVV 264

  Fly   490 -------LNTLEVSG----CRN--------------------FTD------------IGFQALGR 511
                   .:|::.|.    .|:                    |.|            :..:.|||
Zfish   265 SENPGQQFHTIKKSSWDAMVRHSPKFNLVMYFFLYEDEFGPFFRDEIPVTHLYFGRSVSKEVLGR 329

  Fly   512 ---NCKYLERMDLEECS---QITDLTLAHLATGCPSLEKLTLSHCELITDDGIRHLTTGSCAAEI 570
               ||..|  ::|..|:   :..|..|..:|..|..|..:.|..||:            ||:|.:
Zfish   330 VGMNCPRL--VELVVCANGLRPLDEELIRIAERCQFLSAIGLGECEV------------SCSAFV 380

  Fly   571 ------------LSVLE 575
                        ||::|
Zfish   381 EFVKMCGRRLSQLSIME 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 13/43 (30%)
leucine-rich repeat 280..307 CDD:275381 4/26 (15%)
AMN1 <308..453 CDD:187754 35/150 (23%)
leucine-rich repeat 308..327 CDD:275381 3/18 (17%)
leucine-rich repeat 334..359 CDD:275381 5/24 (21%)
leucine-rich repeat 360..385 CDD:275381 7/24 (29%)
leucine-rich repeat 386..411 CDD:275381 8/24 (33%)
AMN1 <409..586 CDD:187754 50/244 (20%)
leucine-rich repeat 412..437 CDD:275381 5/30 (17%)
leucine-rich repeat 438..463 CDD:275381 7/24 (29%)
leucine-rich repeat 464..515 CDD:275381 19/106 (18%)
leucine-rich repeat 516..541 CDD:275381 7/27 (26%)
leucine-rich repeat 542..561 CDD:275381 4/18 (22%)
leucine-rich repeat 571..595 CDD:275381 3/5 (60%)
leucine-rich repeat 596..621 CDD:275381
fbxl3aNP_001005773.3 F-box_SF 39..80 CDD:459239 14/66 (21%)
FBXL3_LRR 83..431 CDD:467832 78/367 (21%)
leucine-rich repeat 178..203 CDD:275381 5/27 (19%)
leucine-rich repeat 204..229 CDD:275381 7/24 (29%)
leucine-rich repeat 230..255 CDD:275381 9/25 (36%)
leucine-rich repeat 256..291 CDD:275381 3/34 (9%)
leucine-rich repeat 292..336 CDD:275381 7/43 (16%)
leucine-rich repeat 337..363 CDD:275381 7/27 (26%)
leucine-rich repeat 364..389 CDD:275381 7/36 (19%)
Blue background indicates that the domain is not in the aligned region.

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