DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and Fbxl7

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001102015.1 Gene:Fbxl7 / 361907 RGDID:1305813 Length:491 Species:Rattus norvegicus


Alignment Length:529 Identity:135/529 - (25%)
Similarity:217/529 - (41%) Gaps:143/529 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 GGSNTRQHSSGSNSRQHSSSSSNSNSSNISPPPSSSSSSRSNNNNNNHSSNIISGFCSTIWRSAT 167
            |.:|.:|:.|....   |||.|:..||:....|:.:..:.:.:.:::.|...:|           
  Rat     2 GANNGKQYGSEGKG---SSSVSSDVSSSTDHTPTKAQKNVATSEDSDLSMRTLS----------- 52

  Fly   168 FGSATPVINPLPAVSINPKI------MESSSDSCSLSSSTT------PDVGLADQQRNMAGSAQD 220
                    .|.||:...|.:      ..||:.|.|::..|.      |...|......:|  ::.
  Rat    53 --------TPSPALICPPALPGFQNGRGSSTSSSSITGETVAMVHSPPPTRLTHPLIRLA--SRP 107

  Fly   221 QSEDQSQTFLGATELDDELIKQLPKEVLLRVFSYLDVVSLCRCAQVCKYWNVLALDGSSWQKINL 285
            |.|..|             |.:||...::::||:|....|||||:||:.|..||.|...|:.|.|
  Rat   108 QKEQAS-------------IDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRL 159

  Fly   286 FDFQRDIEGPV---------------------------------IENISQRCRGFLKSLSLRGCQ 317
            .....:::..:                                 :..|:|.|.. |:.|.:.||.
  Rat   160 TGETINVDRALKVLTRRLCQDTPNVCLMLETVIVSGCRRLTDRGLYTIAQCCPE-LRRLEVSGCY 223

  Fly   318 SVGDQSVRTLANHCHNIEHLDLSDCKKITDIS--------------------------------- 349
            ::.:::|..:.:.|.|:||||:|.|.|:|.||                                 
  Rat   224 NISNEAVFDVVSLCPNLEHLDVSGCSKVTCISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDE 288

  Fly   350 -TQSISRYCSKLTAINLHSCSNITDNSLKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLR 413
             ..:|:.:|::||.:.|..|..:||..|:||...|.::.|::||.|..:|:.|:..:|:...:||
  Rat   289 GLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCTSIKELSVSDCRFVSDFGLREIAKLESRLR 353

  Fly   414 KFSSKGCKQINDNAIMCLAKYCPDLMVLNLHSCETITDSSIRQLAANCHKLQKLCVSKCADLTDL 478
            ..|...|.:|.|..|..:||||..|..||...||.|||..:..||.||.||:.|.:.||      
  Rat   354 YLSIAHCGRITDVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKC------ 412

  Fly   479 TLLSLSQHNHLLNTLEVSGCRNFTDIGFQALGRNCKYLERMDLEECSQITDLTLAHLATGCPSLE 543
            .|:|                    |.|.::|..||..|:|:.|:.|..||...|..:|..|..|:
  Rat   413 PLVS--------------------DTGLESLALNCFNLKRLSLKSCESITGQGLQIVAANCFDLQ 457

  Fly   544 KLTLSHCEL 552
            .|.:..||:
  Rat   458 MLNVQDCEV 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 17/43 (40%)
leucine-rich repeat 280..307 CDD:275381 6/59 (10%)
AMN1 <308..453 CDD:187754 55/178 (31%)
leucine-rich repeat 308..327 CDD:275381 5/18 (28%)
leucine-rich repeat 334..359 CDD:275381 12/58 (21%)
leucine-rich repeat 360..385 CDD:275381 10/24 (42%)
leucine-rich repeat 386..411 CDD:275381 7/24 (29%)
AMN1 <409..586 CDD:187754 48/144 (33%)
leucine-rich repeat 412..437 CDD:275381 11/24 (46%)
leucine-rich repeat 438..463 CDD:275381 12/24 (50%)
leucine-rich repeat 464..515 CDD:275381 11/50 (22%)
leucine-rich repeat 516..541 CDD:275381 9/24 (38%)
leucine-rich repeat 542..561 CDD:275381 4/11 (36%)
leucine-rich repeat 571..595 CDD:275381
leucine-rich repeat 596..621 CDD:275381
Fbxl7NP_001102015.1 F-box_FBXL7 114..157 CDD:438892 18/42 (43%)
leucine-rich repeat 129..151 CDD:275381 11/21 (52%)
leucine-rich repeat 154..187 CDD:275381 3/32 (9%)
AMN1 <185..366 CDD:187754 44/181 (24%)
leucine-rich repeat 188..213 CDD:275381 3/24 (13%)
leucine-rich repeat 214..234 CDD:275381 5/19 (26%)
leucine-rich repeat 240..273 CDD:275381 10/32 (31%)
leucine-rich repeat 274..299 CDD:275381 2/24 (8%)
AMN1 297..464 CDD:187754 64/192 (33%)
leucine-rich repeat 300..325 CDD:275381 10/24 (42%)
leucine-rich repeat 326..351 CDD:275381 7/24 (29%)
leucine-rich repeat 352..377 CDD:275381 11/24 (46%)
leucine-rich repeat 378..403 CDD:275381 12/24 (50%)
leucine-rich repeat 404..429 CDD:275381 11/50 (22%)
leucine-rich repeat 430..453 CDD:275381 8/22 (36%)
leucine-rich repeat 456..480 CDD:275381 4/11 (36%)
Blue background indicates that the domain is not in the aligned region.

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