DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and Fbxo41

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001001160.1 Gene:Fbxo41 / 330369 MGIID:1261912 Length:873 Species:Mus musculus


Alignment Length:597 Identity:137/597 - (22%)
Similarity:226/597 - (37%) Gaps:157/597 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASSAETGVMEVGGTSGTGTGSSSSNNGGGSSSNSGGAGGSIELLCPPSGSSSISGSA-SFSSNSG 66
            |..||..:..:..:.|: |.|:|...|||.|::..|..|...:....:||:..|..| |...:|.
Mouse   334 ADRAERQLQVISSSCGS-TPSASLGRGGGGSASGPGVRGPGRMREHHAGSAVPSTYAVSRHGSSP 397

  Fly    67 ASGSSSQTHSTAVSSATDRSNNNGNNHNPSLQL----------NGNGGSNTR-QHSSGSNSRQHS 120
            ::|:||:..:.:.||        |...:.||:|          :|.||..:| |.::|.:.|   
Mouse   398 STGASSRVPAASQSS--------GCYDSDSLELPRPEEGPSEDSGPGGLGSRAQATNGGSER--- 451

  Fly   121 SSSSNSNSSNISPPPSSSSSSRSNNNN-----NNHSSNIISGFCSTIWRSATFGSA---TPVINP 177
                       |..|.||...|....|     ..||:....|..|.:....|...|   :.|..|
Mouse   452 -----------SQAPRSSGLRRQAIQNWQRRPRRHSTEGEEGDVSDVGSRTTESEAEGPSDVPRP 505

  Fly   178 LPAVSINPKIMESSSDSCSLSSSTTPDVGLADQQRNMAGSAQDQSEDQSQTFLGATELDDELIKQ 242
            .|||:       ...:||.||:  .|:.|....:|...||....:|          .:..|::|.
Mouse   506 GPAVA-------GPLNSCRLSA--RPEGGSGRGRRVERGSPSRSNE----------VISPEILKM 551

  Fly   243 LPKEVLLRVFSYLDVVSLCRCAQVCKYWNVLALDGSSWQKI-------------NLFDFQRDIEG 294
              :..|..:|:|||..:|...|:||:.|..:|...:.|.::             .|..:......
Mouse   552 --RAALFCIFTYLDTRTLLHAAEVCRDWRFVARHPAVWTRVLLENARVCSKFLAMLAQWCTQAHS 614

  Fly   295 PVIENISQRCRGFLKS-----LSLRGCQSVGDQSVRTLA---------NHCHNIEHLDLSDCKKI 345
            ..::|:..|.||..:|     .|.|||...|.:|:...|         :||.||          :
Mouse   615 LTLQNLKPRQRGKKESKEEYARSTRGCLEAGLESLLKAAGGNLLILRISHCPNI----------L 669

  Fly   346 TDISTQSISRYCSKLTAINLHSCSNITDNSLKY-LSDGCPNLMEINVSWCHLISENGVEALARGC 409
            ||.|....|.||..|.|:...|.::...:.:.: |..||.:::.:.|:..|            .|
Mouse   670 TDRSLWLASCYCRALQAVTYRSATDPVGHEVIWALGAGCRDIVSLQVAPLH------------PC 722

  Fly   410 VKLRKFSSKGCKQINDNAIMCLAKYCPDLMVLNL--HSCETITDSSIRQLAANCHKLQKLCVSKC 472
            .:..:||:: |.|:       :.:..|.|..|.:  ..|..   ..:..||.||.:||.|.:...
Mouse   723 QQPTRFSNR-CLQM-------IGRCWPHLRALGVGGAGCGV---QGLASLARNCMRLQVLELDHV 776

  Fly   473 ADLTDLTLLSLSQHNHLLNTLEVSG--CRNFTDIGFQALGRNCKYLERMDLEECSQITDLTLAHL 535
            :::|.                ||:.  ||           ...|.||.:.| ..:.:|...|.|.
Mouse   777 SEITQ----------------EVAAEVCR-----------EGLKGLEMLVL-TATPVTPKALLHF 813

  Fly   536 ATGCPSLEKLTL 547
            .:.|.:|:.:.:
Mouse   814 NSICRNLKSIVV 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 13/43 (30%)
leucine-rich repeat 280..307 CDD:275381 5/39 (13%)
AMN1 <308..453 CDD:187754 35/161 (22%)
leucine-rich repeat 308..327 CDD:275381 7/23 (30%)
leucine-rich repeat 334..359 CDD:275381 7/24 (29%)
leucine-rich repeat 360..385 CDD:275381 6/25 (24%)
leucine-rich repeat 386..411 CDD:275381 3/24 (13%)
AMN1 <409..586 CDD:187754 30/143 (21%)
leucine-rich repeat 412..437 CDD:275381 4/24 (17%)
leucine-rich repeat 438..463 CDD:275381 7/26 (27%)
leucine-rich repeat 464..515 CDD:275381 8/52 (15%)
leucine-rich repeat 516..541 CDD:275381 7/24 (29%)
leucine-rich repeat 542..561 CDD:275381 1/6 (17%)
leucine-rich repeat 571..595 CDD:275381
leucine-rich repeat 596..621 CDD:275381
Fbxo41NP_001001160.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..110
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..193
Smc <200..>342 CDD:440809 3/7 (43%)
CwlO1 209..512 CDD:443091 52/207 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 345..540 58/226 (26%)
F-box_FBXO41 545..591 CDD:438881 14/47 (30%)
leucine-rich repeat 657..683 CDD:275381 10/35 (29%)
leucine-rich repeat 684..710 CDD:275381 6/25 (24%)
leucine-rich repeat 711..742 CDD:275381 7/50 (14%)
leucine-rich repeat 743..767 CDD:275381 7/26 (27%)
leucine-rich repeat 768..794 CDD:275381 8/52 (15%)
leucine-rich repeat 795..819 CDD:275381 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.

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