DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and Fbxl3

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001094038.1 Gene:Fbxl3 / 306129 RGDID:1305660 Length:428 Species:Rattus norvegicus


Alignment Length:401 Identity:87/401 - (21%)
Similarity:158/401 - (39%) Gaps:105/401 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 LPKEVLLRVFSYLDVVSLCRCAQVCKYWNVLALDGSSWQKINLFDFQRDIEGPVIENISQRCRGF 307
            |.::::|.||.||.::.....:|||:.||.:......|:   .|:|:          ::|....:
  Rat    39 LLQDIVLHVFKYLPLLDRAHASQVCRNWNQVFHMPDLWR---CFEFE----------LNQPATSY 90

  Fly   308 LKSLSLRGCQSVGDQSVRTLANHCHNIEHLDLSDCKKITDISTQSISRYCSKLTAINLHSCSNIT 372
            ||:......:.:       :..|.::::::...     .|.|.:|....|..|:  .|.:||..|
  Rat    91 LKATHPELIKQI-------IKRHSNHLQYVSFK-----VDSSKESAEAACDILS--QLVNCSLKT 141

  Fly   373 DNSLKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGCKQINDNAI------MCL 431
               |..:|...|:.|::..|  |.||     ||....|..:..||   .:|:|..:      :.:
  Rat   142 ---LGLISTARPSFMDLPKS--HFIS-----ALTVVFVNSKSLSS---LKIDDTPVDDPSLKVLV 193

  Fly   432 AKYCPDLMVLNLHSCETITDSSIRQLAANCHKLQKLCVSKCADLTDLTLLSLSQHNHL-LNTLEV 495
            |.....|.:|.:.||..::.:.|..:|..||.|::|.::... |:|..||:||...|: |..|.:
  Rat   194 ANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHL-LSDELLLALSSEKHVRLEHLRI 257

  Fly   496 S------GCRNFTDIGFQALGRNCKYLERMDL--------EECSQI--TDLTLAHLATG------ 538
            .      |..:|..|...:.....|:..:::|        ||....  .::...||..|      
  Rat   258 DVVSENPGQTHFHTIQKSSWDAFIKHSPKVNLVMYFFLYEEEFDPFFRYEIPATHLYFGRSVSKD 322

  Fly   539 --------CPSLEKLTLSHCELITDDGIRHLTTGSCAAEILSVLELDNCPLITDRTLEHLVSCHN 595
                    ||.|.:|      ::..:|:|.|.     .|::.:.|                .|.|
  Rat   323 VLGRVGMTCPRLVEL------VVCANGLRPLD-----EELIRIAE----------------RCKN 360

  Fly   596 LQRIELFDCQL 606
            |..|.|.:|::
  Rat   361 LSAIGLGECEV 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 11/37 (30%)
leucine-rich repeat 280..307 CDD:275381 4/26 (15%)
AMN1 <308..453 CDD:187754 32/150 (21%)
leucine-rich repeat 308..327 CDD:275381 2/18 (11%)
leucine-rich repeat 334..359 CDD:275381 4/24 (17%)
leucine-rich repeat 360..385 CDD:275381 7/24 (29%)
leucine-rich repeat 386..411 CDD:275381 7/24 (29%)
AMN1 <409..586 CDD:187754 44/213 (21%)
leucine-rich repeat 412..437 CDD:275381 5/30 (17%)
leucine-rich repeat 438..463 CDD:275381 7/24 (29%)
leucine-rich repeat 464..515 CDD:275381 14/57 (25%)
leucine-rich repeat 516..541 CDD:275381 7/48 (15%)
leucine-rich repeat 542..561 CDD:275381 4/18 (22%)
leucine-rich repeat 571..595 CDD:275381 2/23 (9%)
leucine-rich repeat 596..621 CDD:275381 4/11 (36%)
Fbxl3NP_001094038.1 F-box_FBXL3 34..76 CDD:438949 11/36 (31%)
FBXL3_LRR 79..428 CDD:467832 75/358 (21%)
leucine-rich repeat 174..199 CDD:275381 5/27 (19%)
leucine-rich repeat 200..225 CDD:275381 7/24 (29%)
leucine-rich repeat 252..286 CDD:275381 6/33 (18%)
leucine-rich repeat 287..333 CDD:275381 7/45 (16%)
leucine-rich repeat 334..360 CDD:275381 8/52 (15%)
leucine-rich repeat 361..383 CDD:275381 4/11 (36%)

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