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Protein Alignment CG9003 and AT4G08535

DIOPT Version :10

Sequence 1:	NP_001097271.1	Gene:	CG9003 / 36244	FlyBaseID:	FBgn0033639	Length:	651	Species:	Drosophila melanogaster
Sequence 2:	NP_001328273.1	Gene:	AT4G08535 / 28719998	AraportID:	AT4G08535	Length:	291	Species:	Arabidopsis thaliana

Alignment Length:	319	Identity:	75/319 - (23%)
Similarity:	115/319 - (36%)	Gaps:	85/319 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   326 TLANHCHN----IEHLDLSDCKKITDISTQSISRYCSKLTAINLHSCSNITDNSLKYLSDG---- 382
            |:.|.|..    ..|:||:...|..|...              ||:..|.:...|:.|..|
plant    15 TMFNKCAMDPLCYSHIDLTKAFKYVDDRV--------------LHTLLNRSGKQLRSLKLGRVDA 65

  Fly   383 --------C-PNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGC---KQINDNAIMCLAKYC 435
                    | |.|:....|....: :.|.:|.:.||     |.::.|   .::..|.:..|..|
plant    66 PGSVFRSSCLPPLIHYRNSASRSL-KLGRDAPSPGC-----FFTRSCLDPLKLTGNLLTSLHIY- 123

  Fly   436 PDLMVLNLHSCETITDSSIRQLAANCHKLQKLCVSKCADLTDLTLLSLSQHNHLLNTLEVSGCRN 500
                .|...:.:::.||                :|.|::||||.::.:   |.||..:
plant   124 ----FLGFMNMDSLLDS----------------LSACSNLTDLKIVGV---NVLLEPI------- 158

  Fly   501 FTDIGFQALGRNCKYLERMDLEECSQ--ITDLTLAHLATGCPSLEKLTLSHCELITDDGIRHLTT 563
                 .:.|.|.|..:|.:.|:.|.|  ||..|:....|.|..:..|||....| .|...:.|.|
plant   159 -----LELLARKCCLIEHLFLDNCYQGMITYPTIKLFVTNCLKITSLTLLDFRL-NDAMAQILVT 217

  Fly   564 GSCAAEILSVLELDNCPLITD---RTLEHLVSCHNLQRIELFDCQLITRTAIRKLKNHL 619
            |   ..||..:.|.|...||.   |.|.|..:...||.:.|.||..:....:.:..|.|
plant   218 G---FRILKYINLSNTAGITGSFLRNLGHRSNDSPLQTLILRDCFSLQEREVVEFLNSL 273

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.