DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and FBXL2

DIOPT Version :9

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001336245.1 Gene:FBXL2 / 25827 HGNCID:13598 Length:454 Species:Homo sapiens


Alignment Length:448 Identity:232/448 - (51%)
Similarity:306/448 - (68%) Gaps:32/448 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 DDELI-KQLPKEVLLRVFSYLDVVSLCRCAQVCKYWNVLALDGSSWQKINLFDFQRDIEGPVIEN 299
            |:.|| |:||||:|||:||:||:|:||||||:.|.||:||||||:||:|:||:||.|:||.|:||
Human     7 DEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVEN 71

  Fly   300 ISQRCRGFLKSLSLRGCQSVGDQSVRTLANHCHNIEHLDLSDCKKITDISTQSISRYCSKLTAIN 364
            ||:||.|||:.||||||..|||.|::|.|.:|.|||||:|:.|.||||.:..|:||:||||..::
Human    72 ISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLD 136

  Fly   365 LHSCSNITDNSLKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGCKQINDNAIM 429
            |.||.:||::|||.:|:||.||..:|:|||..|:::|:|||.|||..|:....:||.|:.|.|:.
Human   137 LTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALK 201

  Fly   430 CLAKYCPDLMVLNLHSCETITDSSIRQLAANCHKLQKLCVSKCADLTDLTLLSLSQHNHLLNTLE 494
            .:..||.:|:.|||.||..|||..:.|:...||:||.||:|.|::|||.:|.:|..:...|..||
Human   202 HIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILE 266

  Fly   495 VSGCRNFTDIGFQALGRNCKYLERMDLEECSQITDLTLAHLATGCPSLEKL-------------- 545
            .:.|.:.||.||..|.|||..||:||||||..|||.||..|:..||.|:.|              
Human   267 AARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALVSLSFSDIIHLLKM 331

  Fly   546 -----------------TLSHCELITDDGIRHLTTGSCAAEILSVLELDNCPLITDRTLEHLVSC 593
                             :||||||||||||.||:..:|..|.|.|||||||.||||..||||.:|
Human   332 KEPSHHNKKLFGFSFCKSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENC 396

  Fly   594 HNLQRIELFDCQLITRTAIRKLKNHLPNIKVHAYFAPGTPPAVTSGHRPRYCRCCEIL 651
            ..|:|:||:|||.:||..|::::..||::||||||||.|||...:|...|.||||.||
Human   397 RGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box-like 240..285 CDD:289689 32/45 (71%)
leucine-rich repeat 280..307 CDD:275381 17/26 (65%)
AMN1 <308..453 CDD:187754 74/144 (51%)
leucine-rich repeat 308..327 CDD:275381 11/18 (61%)
leucine-rich repeat 334..359 CDD:275381 14/24 (58%)
leucine-rich repeat 360..385 CDD:275381 12/24 (50%)
leucine-rich repeat 386..411 CDD:275381 13/24 (54%)
AMN1 <409..586 CDD:187754 90/207 (43%)
leucine-rich repeat 412..437 CDD:275381 8/24 (33%)
leucine-rich repeat 438..463 CDD:275381 11/24 (46%)
leucine-rich repeat 464..515 CDD:275381 23/50 (46%)
leucine-rich repeat 516..541 CDD:275381 15/24 (63%)
leucine-rich repeat 542..561 CDD:275381 14/49 (29%)
leucine-rich repeat 571..595 CDD:275381 17/23 (74%)
leucine-rich repeat 596..621 CDD:275381 11/24 (46%)
FBXL2NP_001336245.1 F-box-like 15..56 CDD:315592 29/40 (73%)
leucine-rich repeat 52..79 CDD:275381 17/26 (65%)
AMN1 <76..223 CDD:332986 75/146 (51%)
leucine-rich repeat 80..99 CDD:275381 11/18 (61%)
leucine-rich repeat 106..131 CDD:275381 14/24 (58%)
leucine-rich repeat 132..157 CDD:275381 12/24 (50%)
leucine-rich repeat 158..183 CDD:275381 13/24 (54%)
AMN1 168..398 CDD:332986 102/229 (45%)
leucine-rich repeat 184..209 CDD:275381 8/24 (33%)
leucine-rich repeat 210..235 CDD:275381 11/24 (46%)
leucine-rich repeat 236..261 CDD:275381 11/24 (46%)
leucine-rich repeat 262..287 CDD:275381 12/24 (50%)
leucine-rich repeat 288..313 CDD:275381 15/24 (63%)
leucine-rich repeat 314..364 CDD:275381 14/49 (29%)
leucine-rich repeat 374..393 CDD:275381 14/18 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153018
Domainoid 1 1.000 135 1.000 Domainoid score I4981
eggNOG 1 0.900 - - E1_KOG4341
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 520 1.000 Inparanoid score I1275
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52856
OrthoDB 1 1.010 - - D1046098at2759
OrthoFinder 1 1.000 - - FOG0002896
OrthoInspector 1 1.000 - - otm42042
orthoMCL 1 0.900 - - OOG6_101086
Panther 1 1.100 - - O PTHR13318
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2139
SonicParanoid 1 1.000 - - X1911
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1413.840

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