DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and rhp7

DIOPT Version :9

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_587702.1 Gene:rhp7 / 2539094 PomBaseID:SPCC330.02 Length:563 Species:Schizosaccharomyces pombe


Alignment Length:568 Identity:122/568 - (21%)
Similarity:208/568 - (36%) Gaps:150/568 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 SSGSNSRQHSSS------SSNSNSSNI--SPPPSSSSSSRSNNNNNNHSSNIISGFCSTIWRSAT 167
            ||||..|..:|:      |...|:|.:  :.||..|..|...:.                     
pombe     2 SSGSRVRGPNSALTEFLRSQGINASALGRARPPRQSEESAGQST--------------------- 45

  Fly   168 FGSATPVINPLPAVSINPKIMESSSDSCSLSSSTTPDVGLADQQRNMAG-----SAQDQSEDQSQ 227
             |:.:.||.       .|..:|.:::..:..|:||.::.:. ::||:..     ...:::||...
pombe    46 -GTESEVIQ-------TPTSVEENNEDENSMSTTTIEIPVV-KRRNLRNQKKKKKTDEEAEDNED 101

  Fly   228 TFLGATELDDELIKQLPKEVLLRVFSY--------LDVVSLCRCAQVCKYWNVLALDGSSWQKIN 284
            ||...:...               |||        ||..:.|.|......::..:.....|.   
pombe   102 TFSMNSRAG---------------FSYKAREHTGKLDFCAHCNCRFTITPYSKYSNSEKGWL--- 148

  Fly   285 LFDFQRDIEGPVIENISQRCRGFLKSLSLR-----------GCQSVGDQSVRTLANHCHNIE--- 335
            .:...|..|...:..:..|.|   |:|:.:           ....:.|..:|.:|.:.::||   
pombe   149 CYPCSRGAEDRSVPELRTRKR---KALTRKKVAAATMDEEISVPKLQDLCIRVIAEYINDIEAFG 210

  Fly   336 ----------------------------------HLDLSDCKKITDISTQSISRYCSKLTAINLH 366
                                              .|.|.||.|||..|...|::||..|..::|.
pombe   211 DIGQVNMDKISQIISKNRSLNDTTVKLFLSGGQTELKLYDCSKITADSLFQIAQYCPNLQTLHLT 275

  Fly   367 SCSNITDNSLKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGCK----QINDNA 427
            .|..:.|..|.:.:|....|.:::.....|:|.:         ..:..|..:|.|    ::.|.|
pombe   276 YCGQMQDQVLHFYADHLTELTDVSFQGAFLVSSS---------EWINFFKKRGSKLISLELTDTA 331

  Fly   428 ------IMCLAKYCPDLMVLNLHSCETITDSSIRQLAANCHKLQKLCV-SKCADLTDLTLLS-LS 484
                  |..:...||:|:.|||.....:.|..:| |.|.|..|..|.: |....:.|.::|. |:
pombe   332 RIHVSVINAIVDCCPNLISLNLSRIFYLDDECVR-LLAGCRNLVSLKIESPGGIINDGSILDVLN 395

  Fly   485 QHNHLLNTLEVSGCRNFTD-IGFQALGRNCKYLERMDLEECSQITDLTLAHLATG----CPSLEK 544
            |....|:||.:|||...|| :..|.:|..|..|:.::|.....:|| ..|.:..|    ...||.
pombe   396 QIGSGLHTLSLSGCTKLTDEVLKQGIGPCCGRLKHLNLSGLELLTD-DEASIVFGEWKIQSGLET 459

  Fly   545 LTLSHCELITDDGIRHLTTGSCAAEILSVLELDNCPLITDRTLEHLVS 592
            |:|..|..:.|..:|.:...|  ...|..|:|:....:||..|:::|:
pombe   460 LSLRRCLSLGDKTVRAVLVNS--GHTLRTLDLNGMSFVTDEALQYIVN 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box-like 240..285 CDD:289689 8/52 (15%)
leucine-rich repeat 280..307 CDD:275381 5/26 (19%)
AMN1 <308..453 CDD:187754 40/202 (20%)
leucine-rich repeat 308..327 CDD:275381 4/29 (14%)
leucine-rich repeat 334..359 CDD:275381 13/61 (21%)
leucine-rich repeat 360..385 CDD:275381 6/24 (25%)
leucine-rich repeat 386..411 CDD:275381 3/24 (13%)
AMN1 <409..586 CDD:187754 54/193 (28%)
leucine-rich repeat 412..437 CDD:275381 7/34 (21%)
leucine-rich repeat 438..463 CDD:275381 9/24 (38%)
leucine-rich repeat 464..515 CDD:275381 18/53 (34%)
leucine-rich repeat 516..541 CDD:275381 6/28 (21%)
leucine-rich repeat 542..561 CDD:275381 7/18 (39%)
leucine-rich repeat 571..595 CDD:275381 7/22 (32%)
leucine-rich repeat 596..621 CDD:275381
rhp7NP_587702.1 AMN1 210..452 CDD:187754 61/252 (24%)
leucine-rich repeat 244..262 CDD:275381 8/17 (47%)
leucine-rich repeat 269..321 CDD:275381 11/60 (18%)
leucine-rich repeat 322..347 CDD:275381 4/24 (17%)
leucine-rich repeat 348..372 CDD:275381 9/24 (38%)
leucine-rich repeat 373..399 CDD:275381 7/25 (28%)
leucine-rich repeat 401..427 CDD:275381 11/25 (44%)
leucine-rich repeat 428..456 CDD:275381 6/28 (21%)
leucine-rich repeat 457..483 CDD:275381 8/27 (30%)
leucine-rich repeat 511..536 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2139
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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