DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and fbxl21

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_002935952.1 Gene:fbxl21 / 100489356 XenbaseID:XB-GENE-987711 Length:458 Species:Xenopus tropicalis


Alignment Length:401 Identity:96/401 - (23%)
Similarity:155/401 - (38%) Gaps:105/401 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 LPKEVLLRVFSYLDVVSLCRCAQVCKYWNVLALDGSSWQKINLFDFQRDIEGPVIENISQRCRGF 307
            ||..|:|.:|.||.:|...|.:.||:.||.:......|:|   |:|:          ::|....:
 Frog    69 LPHHVVLHIFQYLPLVDRARASSVCRRWNEVFHIPELWRK---FEFE----------LNQPATSY 120

  Fly   308 LKSLSLRGCQSVGDQSVRTLANHCHNIEHLDLSDCKKITDISTQSISRYCSKLTAINLHSCSNIT 372
            |||       :..|...:.:..|..:::::...     .|..|:|....|..|:  .|.:||..|
 Frog   121 LKS-------THPDLIQQIIKKHADHLQYVSFK-----VDSCTESAEAACDILS--QLVNCSIKT 171

  Fly   373 DNSLKYLSDGCPNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGCKQINDNAI------MCL 431
               |..:|...|:.|  |||..|.:|     ||....|..:..||   .:|:|..:      :.:
 Frog   172 ---LGLISTAKPSFM--NVSKSHFVS-----ALTVVFVNSKSLSS---IKIDDTPVDDPSLKVLV 223

  Fly   432 AKYCPDLMVLNLHSCETITDSSIRQLAANCHKLQKLCVSKCADLTDLTLLSLSQHNHL-LNTLEV 495
            |.....|.:|.:.||..::.:.|..:|..||.|::|.::... |:|..||:||...|: |..|.:
 Frog   224 ANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHL-LSDELLLALSTEKHVRLEHLRI 287

  Fly   496 S------GCRNFTDIGFQALGRNCK-------------YLERMD--LEECSQITDL--------- 530
            .      |...|..|..|:.....|             |.|..|  ..|.:.:|.|         
 Frog   288 DVVSENPGQTQFHTIKKQSWDALIKHSPKVNIVMYFFLYEEEFDAFFREETPVTHLYFGRAVSKA 352

  Fly   531 TLAHLATGCPSLEKLTLSHCELITDDGIRHLTTGSCAAEILSVLELDNCPLITDRTLEHLVSCHN 595
            .|..:...||.|.:|      ::..:|::.|.              |....|.||       |.|
 Frog   353 MLGRIGMNCPRLIEL------VVCANGLQPLD--------------DELIRIADR-------CKN 390

  Fly   596 LQRIELFDCQL 606
            |..|.|.:|::
 Frog   391 LTAIGLGECEV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 13/37 (35%)
leucine-rich repeat 280..307 CDD:275381 5/26 (19%)
AMN1 <308..453 CDD:187754 35/150 (23%)
leucine-rich repeat 308..327 CDD:275381 4/18 (22%)
leucine-rich repeat 334..359 CDD:275381 4/24 (17%)
leucine-rich repeat 360..385 CDD:275381 7/24 (29%)
leucine-rich repeat 386..411 CDD:275381 8/24 (33%)
AMN1 <409..586 CDD:187754 46/213 (22%)
leucine-rich repeat 412..437 CDD:275381 5/30 (17%)
leucine-rich repeat 438..463 CDD:275381 7/24 (29%)
leucine-rich repeat 464..515 CDD:275381 16/70 (23%)
leucine-rich repeat 516..541 CDD:275381 7/35 (20%)
leucine-rich repeat 542..561 CDD:275381 3/18 (17%)
leucine-rich repeat 571..595 CDD:275381 5/23 (22%)
leucine-rich repeat 596..621 CDD:275381 4/11 (36%)
fbxl21XP_002935952.1 F-box_FBXL21 64..106 CDD:438950 13/36 (36%)
FBXL3_LRR 109..458 CDD:467832 81/358 (23%)
leucine-rich repeat 204..229 CDD:275381 5/27 (19%)
leucine-rich repeat 230..255 CDD:275381 7/24 (29%)
leucine-rich repeat 256..281 CDD:275381 9/25 (36%)
leucine-rich repeat 282..316 CDD:275381 7/33 (21%)
leucine-rich repeat 327..363 CDD:275381 7/35 (20%)
leucine-rich repeat 364..390 CDD:275381 9/52 (17%)
leucine-rich repeat 391..416 CDD:275381 4/11 (36%)

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