DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9003 and si:dkey-192l18.9

DIOPT Version :10

Sequence 1:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_001344855.1 Gene:si:dkey-192l18.9 / 100005961 ZFINID:ZDB-GENE-120709-25 Length:476 Species:Danio rerio


Alignment Length:545 Identity:147/545 - (26%)
Similarity:233/545 - (42%) Gaps:100/545 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GNNHNPSLQLNGNGGSNTRQHSSGSNSRQHSSSSSNSNSSNISPPPSSSSSSRSNNN-------N 147
            |.|:....:..|.|.|:.  .|..|:|.:|:.|.|:.|::      :|..|.:|...       |
Zfish     2 GANNGKQCESEGKGSSSI--SSDVSSSTEHTPSKSHKNAA------TSEDSDQSMRTPSPALILN 58

  Fly   148 NNHSSNIISGFCSTIWRSATFGSATPVINPLPAVSINPKIMESSSDSCSLSSSTTPDVGLADQQR 212
            .|....:.:|      |.::.|....:|:|.||               :.|.||.|.        
Zfish    59 PNPPQTVPNG------RESSLGETVALIHPPPA---------------TRSKSTKPP-------- 94

  Fly   213 NMAGSAQDQSEDQSQTFLGATELDDELIKQLPKEVLLRVFSYLDVVSLCRCAQVCKYWNVLALDG 277
                                   ...||..||..|||.:.|||....||.||:||:.|..|:.|.
Zfish    95 -----------------------HTALIDILPDPVLLHILSYLSTPHLCLCARVCRRWYNLSWDP 136

  Fly   278 SSWQKINLFDFQRDIEGPVIENISQRCRGFLKSLSLRGCQSVGDQSVRTLANHCHNIEHLDLSDC 342
            ..|..|.|       .|.::.  :.|.   ||.|:.|.||..        .|.|..:|.:..|.|
Zfish   137 RLWSTIRL-------NGELLN--ADRA---LKVLTHRLCQDT--------PNVCLTLETVVASGC 181

  Fly   343 KKITDISTQSISRYCSKLTAINLHSCSNITDNSLKYLSDGCPNLMEINVSWC------HLISENG 401
            ::::|...:.|:|.|.:|..:.:..|.|::::::..:...||||..::||.|      .|..|..
Zfish   182 RRLSDRGLRVIARCCPELRCLEVAGCYNVSNDAVFDVVSKCPNLEHLDVSGCPKVTCISLTEEGS 246

  Fly   402 VE--ALARGCVKLRKFSSKGCKQINDNAIMCLAKYCPDLMVLNLHSCETITDSSIRQLAANCHKL 464
            |:  .|....:.||..:...|..:.|..:..:|.:||.|..|.|..|..|||.|:||||.:|..|
Zfish   247 VQHTPLHGQQIGLRYLNMTDCVSLEDKGLKTIAIHCPRLTHLYLRRCIRITDESLRQLALHCTAL 311

  Fly   465 QKLCVSKCADLTDLTLLSLSQHNHLLNTLEVSGCRNFTDIGFQALGRNCKYLERMDLEECSQITD 529
            ::|.:|.|..:.|..|..:::....|..|.|:.|...||:|.:.:.|.|..|..::...|..:||
Zfish   312 RELSLSDCHLVGDFGLREVARLEGRLRYLSVAHCMRITDVGLRYVARYCPRLRYLNARGCEGLTD 376

  Fly   530 LTLAHLATGCPSLEKLTLSHCELITDDGIRHLTTGSCAAEILSVLELDNCPLITDRTLEHLV-SC 593
            ..|::||..||.|..:.:..|.|::|.|:..|  ..| .::|..|.|..|..:|.|.|..|. .|
Zfish   377 QGLSYLARNCPRLRSIDVGRCPLVSDAGLEVL--AHC-CKMLRRLSLRGCESLTGRGLMALAEGC 438

  Fly   594 HNLQRIELFDCQLITRTAIRKLKNH 618
            ..||.:.:.:|. :...|:|.::.|
Zfish   439 PELQLLNVQECD-VPPEALRLVRQH 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 19/43 (44%)
leucine-rich repeat 280..307 CDD:275381 5/26 (19%)
AMN1 <308..453 CDD:187754 43/152 (28%)
leucine-rich repeat 308..327 CDD:275381 6/18 (33%)
leucine-rich repeat 334..359 CDD:275381 7/24 (29%)
leucine-rich repeat 360..385 CDD:275381 4/24 (17%)
leucine-rich repeat 386..411 CDD:275381 8/32 (25%)
AMN1 <409..586 CDD:187754 56/176 (32%)
leucine-rich repeat 412..437 CDD:275381 6/24 (25%)
leucine-rich repeat 438..463 CDD:275381 13/24 (54%)
leucine-rich repeat 464..515 CDD:275381 15/50 (30%)
leucine-rich repeat 516..541 CDD:275381 8/24 (33%)
leucine-rich repeat 542..561 CDD:275381 5/18 (28%)
leucine-rich repeat 571..595 CDD:275381 9/24 (38%)
leucine-rich repeat 596..621 CDD:275381 6/23 (26%)
si:dkey-192l18.9XP_001344855.1 F-box_FBXL7 99..142 CDD:438892 19/42 (45%)
leucine-rich repeat 114..138 CDD:275381 10/23 (43%)
leucine-rich repeat 139..172 CDD:275381 13/52 (25%)
FBXL3_LRR-like <152..350 CDD:480268 60/208 (29%)
leucine-rich repeat 173..198 CDD:275381 7/24 (29%)
leucine-rich repeat 199..220 CDD:275381 3/20 (15%)
leucine-rich repeat 225..258 CDD:275381 8/32 (25%)
leucine-rich repeat 259..284 CDD:275381 6/24 (25%)
AMN1 280..465 CDD:187754 61/187 (33%)
leucine-rich repeat 285..310 CDD:275381 13/24 (54%)
leucine-rich repeat 311..336 CDD:275381 6/24 (25%)
leucine-rich repeat 337..362 CDD:275381 9/24 (38%)
leucine-rich repeat 363..388 CDD:275381 8/24 (33%)
leucine-rich repeat 389..414 CDD:275381 7/27 (26%)
leucine-rich repeat 415..440 CDD:275381 9/24 (38%)
leucine-rich repeat 441..465 CDD:275381 6/23 (26%)

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