DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and Acox3

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_063129745.1 Gene:Acox3 / 83522 RGDID:69245 Length:702 Species:Rattus norvegicus


Alignment Length:567 Identity:106/567 - (18%)
Similarity:192/567 - (33%) Gaps:172/567 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 RYLQDLATGKLIGTEAIYEIS-PPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPG-ERQLF--- 243
            :||:.:...::.|..|:.|:| ........|||...|        ..:.|::.:|. |...|   
  Rat   142 KYLEKIYNLEIFGCFALTELSHGSNTKAMRTTAHYDP--------ATQEFILHSPDFEAAKFWVG 198

  Fly   244 ---------LVLAQTQQPNVPGVLG--RGTTIFLVDSQ-------QEGVRLGEKHATFGCRKAEI 290
                     :|.||...|:     |  ||...|||..:       ..||.:|:.....|....:.
  Rat   199 NLGKTATHAVVFAQLYTPD-----GQCRGLHSFLVQIRDPKTLLPMPGVMVGDMGKKLGQNGLDN 258

  Fly   291 RRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRS------SRLRGSLVGLSLAK-----------KL 338
            ....|..|::....:  |...||..||....:      .||..||..||..:           ||
  Rat   259 GFAMFHKVRIPRQNL--LDRTGNVTSEGTYNTPFKDVRQRLGASLGSLSSGRISIISISVVNLKL 321

  Fly   339 LNELA-QYTVNTTQCG------VQLQDLELTRIHMSRAMCSVYAME---SMLYLTAGLLDEFRA- 392
            ...:| :::....|.|      :.:.:..|.:..:...:.:.||::   ..::|....|...|. 
  Rat   322 AVIIAIRFSATRRQFGPTDKEEIPVLEYPLQQWRLLPYLAAAYALDHFSKTIFLDLIELQRGRQS 386

  Fly   393 ---QDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLC----------- 443
               .|...|..       |:::|:||..      |.|.|. |.:.|:::..:.|           
  Rat   387 GDHSDRQAELG-------REIHALASAG------KPLASW-TAQRGIQECREACGGHGYLAMNRF 437

  Fly   444 ------------TQGES---LDTLGMFIALTGLQHAGQ--AMNTGVRKSRNPL-FNPGHIFGKFL 490
                        .:|::   |.....:: |:.|:|..|  |..|...|:.|.| ..||.:..||:
  Rat   438 GELRNDNDPNCTYEGDNNVLLQQTSNYL-LSLLEHPLQDGAHFTSPLKTVNFLEAYPGILGQKFM 501

  Fly   491 DNNSIDNPKTKMQLSEH-------VHPSLEAAAQ-------------------CIELSVARLQMA 529
            .::..|...::..|:.:       :..|.:...|                   |..|::|.:::.
  Rat   502 ASSKADWLDSEAPLAAYRWLVCYLLRESHQRYCQEKKSRGSDFEARNNSQVYGCRPLALAFMELT 566

  Fly   530 VELMFTKHGNAVVERQSEMQRLAEVGTLIYAMWASVARASRSYCIGLPLADHELLTATAICSEG- 593
            |...|.:|.::.....|....|..: :::|.:|.              |:.|     ||:...| 
  Rat   567 VMQRFHEHTHSSSVPPSLRTVLGRL-SMLYGLWC--------------LSQH-----TALLYRGG 611

  Fly   594 -----------RDRVRTLCTEIYGGHFVNNDNNLVRLSKQVAKSKGY 629
                       .|.:..||.::....|..|..: |...:.:...:||
  Rat   612 YISGEQTGKAMEDAILMLCVQVSRVTFAGNPLS-VHTVQPLLSPRGY 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 66/352 (19%)
Acox3XP_063129745.1 None

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