DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acadvl

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_997776.1 Gene:acadvl / 573723 ZFINID:ZDB-GENE-030131-899 Length:659 Species:Danio rerio


Alignment Length:647 Identity:165/647 - (25%)
Similarity:276/647 - (42%) Gaps:79/647 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RSTKATSSSLDSQHQDAATTEGGRAESVEESPEQQRKLPTREPLAKNFFIGVVD-KELLAYPEVI 89
            |.|.||:.::|.           ...|||.           :..|.|.|.|.:. .::..||.|:
Zfish    57 RDTTATAETVDK-----------AVVSVES-----------KSFAVNMFKGQISTSQVFPYPSVL 99

  Fly    90 PRDEMAQLENSLL------------PLKNYFVEPRETEETSPETLRQLGLYGLNVSTDYEGKG-- 140
             .:|.:|....|:            |:||..:|  :.||.:.:.|:::|.:||.|..|..|.|  
Zfish   100 -NEEQSQFLRELVGPCSKFFEEVNDPMKNDALE--KVEEHTLQGLKEMGAFGLQVPADLGGVGLT 161

  Fly   141 ---YGWSASLMASEPDSTDINVTLGLQTHRVVVDLLKEV---GTPLQQQRYLQDLATGKLIGTEA 199
               |.....::...    |:.|.:.|..|:.:.  .|.:   |.|.|:::||..||||:.|....
Zfish   162 NTQYARLVEIVGMH----DLGVGITLGAHQSIG--FKGILLFGNPQQKEKYLPKLATGENIAAFC 220

  Fly   200 IYE-ISPPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFLVLAQTQ-QPNVPGVLGRGT 262
            :.| .|..:.....|||...|....:.:||.|.: |...|..::|.|.|:|. :....|.:....
Zfish   221 LTEPASGSDAASIKTTAVRSPCGQYYTMNGSKIW-ISNGGTAEIFTVFAKTPVKDEKTGEMKDKI 284

  Fly   263 TIFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRLRG 327
            |.|:|:....||..|......|.:.:....|:||.|::..|.|:|....|.:.:..::.:.|. |
Zfish   285 TAFIVERSFGGVSSGPPEKKMGIKASNTAEVYFENVRVPADCVLGEVGGGFKVAMNILNNGRF-G 348

  Fly   328 SLVGLS-LAKKLLNELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFR 391
            ....|| ..|.::.:...:..|.||.|.::.:....:..|:|.....|..|||.|:.:|.:|. .
Zfish   349 MAAALSGTMKGVITKAVDHAANRTQFGNKIHNYGAIQEKMARMAMLQYVTESMAYMVSGNMDS-G 412

  Fly   392 AQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLCTQGESLDTLGMFI 456
            |.:..:|:||:|.|.....:.:..:.:.|:|....:.....|..|||.........:.|.|.:|:
Zfish   413 ATEFQIEAAISKIFASEAAWLVTDECIQVMGGMGFMKDAGVERVLRDLRIFRIFEGTNDILRLFV 477

  Fly   457 ALTGLQHAGQAMNTGVRKSRNPLFNPGHIFGKFLDNNSIDNPKTK-----------MQLSEHVHP 510
            ||.|.|:||..:.:..:..:|||.|.|.:.|:.          ||           :.|...|||
Zfish   478 ALNGFQNAGNQLKSLQKALKNPLGNAGMLAGEI----------TKRAKRRAGLGSGLTLQGTVHP 532

  Fly   511 SLEAAAQCIELSVARLQMAVELMFTKHGNAVVERQSEMQRLAEVGTLIYAMWASVARASRSYCIG 575
            .|..:.:....::.:....:|.:..|||..:::.|..::|:|:....:|||...::|||||...|
Zfish   533 ELNHSGELTVKAIEQFGAVIEELLLKHGKKIIDEQFVLKRVADCAIDLYAMVVVLSRASRSLNQG 597

  Fly   576 LPLADHELLTATAICSEGRDRVRTLCTEIYGGHFVNNDNNLVRLSKQVAKSKGYFAVHPLTF 637
            ...|.||.:.....|:|..:||......:..|.......||..:|..|.::.|..|.|||.|
Zfish   598 HSSAQHEKMLCETWCTEAHERVMQDIKFLRSGTSKQTFKNLRAISAAVVENGGVVAPHPLGF 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 97/387 (25%)
CaiA 122..439 CDD:224871 84/327 (26%)
acadvlNP_997776.1 VLCAD 77..486 CDD:173850 108/420 (26%)
CaiA 107..478 CDD:224871 95/381 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D163462at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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