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Protein Alignment Egm and Ivd

DIOPT Version :9

Sequence 1:	NP_610687.1	Gene:	Egm / 36242	FlyBaseID:	FBgn0086712	Length:	639	Species:	Drosophila melanogaster
Sequence 2:	NP_062800.1	Gene:	Ivd / 56357	MGIID:	1929242	Length:	424	Species:	Mus musculus

Alignment Length:	449	Identity:	94/449 - (20%)
Similarity:	169/449 - (37%)	Gaps:	127/449 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    61 RKLPTREPLA---KNFFIGVVDKELLAYPEVIPRDEMAQLENSLLPL--KNYFVEPRETEETSP- 119
            |..|:..|||   :...|..||.::....|     |..||.:::...  :|...:.:|.::|:.
Mouse    16 RLRPSPSPLAVPRRAHSILPVDDDINGLNE-----EQKQLRHTISKFLQENLAPKAQEIDQTNDF 75

  Fly   120 ETLRQ-------LGLYGLNVSTDYEGKGYGWSASLMASEP---DSTDINVTLGLQTHRVVVDLLK 174
            :.||:       ||:.|:.....|.|.|.|:...::..|.   .|..:.::.|..::..|..:::
Mouse    76 KNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCVNQIVR 140

  Fly   175 EVGTPLQQQRYLQDLATGKLIGTEAIYEISPPE--EDYFNTTAELFPEYGKWQLNGEKSFVICTP 237
            . |...|:::||..|.:|:.||..|   :|.|.  .|..:...:...:...:.|||.|.::...|
Mouse   141 N-GNEAQKEKYLPKLISGEFIGALA---MSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGP 201

  Fly   238 GERQLFLVLAQTQQPNVPGVLGRGTTIFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFEGVKLGE 302
             :..:.:|.|:|....||.  .||.|.|:|:.
Mouse   202 -DADILVVYAKTDLTAVPA--SRGITAFIVEK--------------------------------- 230

  Fly   303 DQVVGLPHDGNRYSEQLVRSSRLRGSLVGLSLAKKLLNELAQYTVNTTQCGVQLQDLELTRIH-M 366
                |:|                     |.|.:|| |::|.....||  |.:..:|.::...: :
Mouse   231 ----GMP---------------------GFSTSKK-LDKLGMRGSNT--CELVFEDCKVPAANVL 267

  Fly   367 SRAMCSVYAMES-----MLYLTAGLLDEFRAQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSL 426
            |:....||.:.|     .|.|..|.|...:|   .|:..| .|..:|:.:.      ..:|...|
Mouse   268 SQESKGVYVLMSGLDLERLVLAGGPLGIMQA---VLDHTI-PYLHVREAFG------QKIGQFQL 322

  Fly   427 LSGETTELGLR---------DAAQLCTQGESL--DTLGMF---------IALTGLQHAG 465
            :.|:..::..|         :.|:.|.:|..:  |..|:.         :||.|:|..|
Mouse   323 MQGKMADMYTRLMASRQYVYNVAKACDEGHIIPKDCAGVILYAAECATQVALDGIQCLG 381

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.