DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Egm and Acox1

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_059036.1 Gene:Acox1 / 50681 RGDID:619757 Length:661 Species:Rattus norvegicus


Alignment Length:675 Identity:119/675 - (17%)
Similarity:215/675 - (31%) Gaps:252/675 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VEESPEQQRKLPTREPLAKNFFIGVVDKELLAYPEVIPRDEMAQLENSLLPLKNYFVEPRETEET 117
            ::.|||..|:  .||          ::..:|..|:....|     .|.|...:.|.|..::    
  Rat    23 LDGSPENTRR--RRE----------IENLILNDPDFQHED-----YNFLTRSQRYEVAVKK---- 66

  Fly   118 SPETLRQLGLYGLNVSTDYEGKGYGWSASLMAS---EPDSTDINVTLGLQTHRVVVDLLKEVGTP 179
            |...::::..||::     :.:...|...|..:   ||        :||.....:..||.: ||.
  Rat    67 SATMVKKMREYGIS-----DPEEIMWFKKLYLANFVEP--------VGLNYSMFIPTLLNQ-GTT 117

  Fly   180 LQQQRYLQDLATGKLIGTEAIYEISPPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFL 244
            .||:::::.....::|||.|..|:.                :|. .|.|.::.....|..::..|
  Rat   118 AQQEKWMRPSQELQIIGTYAQTEMG----------------HGT-HLRGLETTATYDPKTQEFIL 165

  Fly   245 VLAQTQQPNV------PGVLGR------------------GTTIFLVDSQQ-------EGVRLGE 278
                 ..|.|      ||.||:                  |...|:|..::       .|:.:|:
  Rat   166 -----NSPTVTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGD 225

  Fly   279 KHATFGCRKAEIRRVHFEGVKLGEDQVV----GLPHDGNRYSEQLVRSSRL--------RGSLVG 331
            ....||..:.:...:..:..::..:.::    .:..||. |.:.|  |::|        |..|||
  Rat   226 IGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGT-YVKPL--SNKLTYGTMVFVRSFLVG 287

  Fly   332 ---LSLAKKLLNEL------AQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLL 387
               .||:|.....:      .|..:..::...|:.|.:..:..:...:.:.||..          
  Rat   288 NAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFH---------- 342

  Fly   388 DEFRAQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTEL--------GLRDAAQLCT 444
                        .:.:|  :::.|...::::|        .|:.:||        ||: |....|
  Rat   343 ------------FVGRY--MKETYLRINESIG--------QGDLSELPELHALTAGLK-AFTTWT 384

  Fly   445 QGESLDTLGMFIALTGLQHAGQAMNTGVRKSRNPLFNPGHIFGKFLDNNSIDNPKTKMQL----- 504
            ....::...|.....|..|:....|..|      .|.|...|         :...|.|.|     
  Rat   385 ANAGIEECRMACGGHGYSHSSGIPNIYV------TFTPACTF---------EGENTVMMLQTARF 434

  Fly   505 -------------------------SEHVHP-------------SLEAAAQCIELSVARLQMAVE 531
                                     |:.:.|             |||...:..:|..|||   ||
  Rat   435 LMKIYDQVRSGKLVGGMVSYLNDLPSQRIQPQQVAVWPTMVDINSLEGLTEAYKLRAARL---VE 496

  Fly   532 LMFTKHGNAVVERQSEMQRLAEVGTLIYAMW----ASVARASRSYC---------IGLPLADHEL 583
            :........|..|:|:     ||.      |    ..:.|||.::|         ..||....:.
  Rat   497 IAAKNLQTHVSHRKSK-----EVA------WNLTSVDLVRASEAHCHYVVVKVFSDKLPKIQDKA 550

  Fly   584 LTATAICSEGRDRVRTLCT--EIYG 606
            :.|.         :|.||.  .:||
  Rat   551 VQAV---------LRNLCLLYSLYG 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 72/427 (17%)
Acox1NP_059036.1 AXO 3..638 CDD:173839 119/675 (18%)
Microbody targeting signal. /evidence=ECO:0000255 659..661
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.