DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Egm and Acox1

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_059036.1 Gene:Acox1 / 50681 RGDID:619757 Length:661 Species:Rattus norvegicus


Alignment Length:675 Identity:119/675 - (17%)
Similarity:215/675 - (31%) Gaps:252/675 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VEESPEQQRKLPTREPLAKNFFIGVVDKELLAYPEVIPRDEMAQLENSLLPLKNYFVEPRETEET 117
            ::.|||..|:  .||          ::..:|..|:....|     .|.|...:.|.|..::    
  Rat    23 LDGSPENTRR--RRE----------IENLILNDPDFQHED-----YNFLTRSQRYEVAVKK---- 66

  Fly   118 SPETLRQLGLYGLNVSTDYEGKGYGWSASLMAS---EPDSTDINVTLGLQTHRVVVDLLKEVGTP 179
            |...::::..||::     :.:...|...|..:   ||        :||.....:..||.: ||.
  Rat    67 SATMVKKMREYGIS-----DPEEIMWFKKLYLANFVEP--------VGLNYSMFIPTLLNQ-GTT 117

  Fly   180 LQQQRYLQDLATGKLIGTEAIYEISPPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFL 244
            .||:::::.....::|||.|..|:.                :|. .|.|.::.....|..::..|
  Rat   118 AQQEKWMRPSQELQIIGTYAQTEMG----------------HGT-HLRGLETTATYDPKTQEFIL 165

  Fly   245 VLAQTQQPNV------PGVLGR------------------GTTIFLVDSQQ-------EGVRLGE 278
                 ..|.|      ||.||:                  |...|:|..::       .|:.:|:
  Rat   166 -----NSPTVTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGD 225

  Fly   279 KHATFGCRKAEIRRVHFEGVKLGEDQVV----GLPHDGNRYSEQLVRSSRL--------RGSLVG 331
            ....||..:.:...:..:..::..:.::    .:..||. |.:.|  |::|        |..|||
  Rat   226 IGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGT-YVKPL--SNKLTYGTMVFVRSFLVG 287

  Fly   332 ---LSLAKKLLNEL------AQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLL 387
               .||:|.....:      .|..:..::...|:.|.:..:..:...:.:.||..          
  Rat   288 NAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFH---------- 342

  Fly   388 DEFRAQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTEL--------GLRDAAQLCT 444
                        .:.:|  :::.|...::::|        .|:.:||        ||: |....|
  Rat   343 ------------FVGRY--MKETYLRINESIG--------QGDLSELPELHALTAGLK-AFTTWT 384

  Fly   445 QGESLDTLGMFIALTGLQHAGQAMNTGVRKSRNPLFNPGHIFGKFLDNNSIDNPKTKMQL----- 504
            ....::...|.....|..|:....|..|      .|.|...|         :...|.|.|     
  Rat   385 ANAGIEECRMACGGHGYSHSSGIPNIYV------TFTPACTF---------EGENTVMMLQTARF 434

  Fly   505 -------------------------SEHVHP-------------SLEAAAQCIELSVARLQMAVE 531
                                     |:.:.|             |||...:..:|..|||   ||
  Rat   435 LMKIYDQVRSGKLVGGMVSYLNDLPSQRIQPQQVAVWPTMVDINSLEGLTEAYKLRAARL---VE 496

  Fly   532 LMFTKHGNAVVERQSEMQRLAEVGTLIYAMW----ASVARASRSYC---------IGLPLADHEL 583
            :........|..|:|:     ||.      |    ..:.|||.::|         ..||....:.
  Rat   497 IAAKNLQTHVSHRKSK-----EVA------WNLTSVDLVRASEAHCHYVVVKVFSDKLPKIQDKA 550

  Fly   584 LTATAICSEGRDRVRTLCT--EIYG 606
            :.|.         :|.||.  .:||
  Rat   551 VQAV---------LRNLCLLYSLYG 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 72/427 (17%)
CaiA 122..439 CDD:224871 63/379 (17%)
Acox1NP_059036.1 AXO 3..638 CDD:173839 119/675 (18%)
Microbody targeting signal 659..661
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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