DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acox1

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001005933.1 Gene:acox1 / 449662 ZFINID:ZDB-GENE-041010-219 Length:660 Species:Danio rerio


Alignment Length:525 Identity:101/525 - (19%)
Similarity:170/525 - (32%) Gaps:174/525 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 EQQRKLPTREPLAKNF-FIGVVDKELLAYPEVI----------PRDEMAQLENSLLPLKNYFVEP 111
            ||::|.   .|||::| .:|...:..|.:...|          |..:...|.:|.:....::  |
Zfish   118 EQRKKW---IPLAESFHMLGTYAQTELGHGTHIRALETTATYDPSTQEFVLNSSTISSIKWW--P 177

  Fly   112 RETEETSPETLRQLGLYGLNVSTDYEGKGYGWSASLMASEPDSTDINVTLGLQTHR-----VVVD 171
            ....:||...:....||       .:||.:|..|.:       |.|..   ::||.     ||.|
Zfish   178 GGLGKTSNHAIVLAQLY-------TQGKCHGLHAFI-------TPIRC---MKTHMPLPGVVVGD 225

  Fly   172 LLKEVGTPLQQQRYLQDLATGKLIGTEAIYEISPPEEDYFNTTAELFPE------------YG-- 222
            :..:.|.......||:            :..:..|.|:.....|::.|:            ||  
Zfish   226 IGPKFGFDEVDNGYLK------------LENVRIPRENMLMKYAQVEPDGTYVKPPSDKLTYGTM 278

  Fly   223 ---KWQLNGEKSFVI---CT---------------PGERQLFLVLAQTQQPNVPGVLGRGTTIFL 266
               :..:.||.:..:   ||               |||.:..::..||||..:..:|........
Zfish   279 VFIRSMIVGESARALSKSCTIAIRYSAVRHQSELRPGEPEPQILDYQTQQYKLFPLLATAYAFHF 343

  Fly   267 VDSQQE--------GVRLG------EKHATFGCRKA----------EIRRVHFEGVKLGEDQVVG 307
            |.....        .:.||      |.||.....||          |:.|:...|  .|..:...
Zfish   344 VGQYMNKTYHRISGDISLGDFSELPELHALSAGLKAFTTWAANTGIEVCRMSCGG--HGYSRCSS 406

  Fly   308 LP-----------HDGN---------RYSEQLVRSSRLRGSLVGL-SLAKKLLNELAQYTVNTTQ 351
            ||           ::|.         ||..:..:.:|....|.|: |...:..:.:..::|::..
Zfish   407 LPDIYVTFTPTCTYEGENTVMMLQTARYLVKSYKQARAGQQLTGIVSYLNESQSRIQPHSVSSRP 471

  Fly   352 CGVQLQDL-ELTRIHMSRA--MCSVYAMESMLYLTAG----------LLDEFRAQDVTLESAITK 403
            ..|.:.|| .|...:..||  :..|.|....|.|...          .:|..||.|......:.|
Zfish   472 TVVNINDLVSLVEAYKFRAAKLVEVAAKNLQLELQHSKSNEDAWNNTSIDLVRASDAHCHYVVVK 536

  Fly   404 YFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLCTQGESLDTLGMFIALTGL-QHAGQA 467
            .|..:         |..:|.|::.|                   .|.||.:..||.|: |::|..
Zfish   537 LFAAK---------LSEIGDKAVHS-------------------VLSTLALLYALHGVAQNSGDF 573

  Fly   468 MNTGV 472
            :..|:
Zfish   574 LKAGL 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 84/462 (18%)
CaiA 122..439 CDD:224871 76/414 (18%)
acox1NP_001005933.1 AXO 3..637 CDD:173839 101/525 (19%)
PLN02443 5..656 CDD:178062 101/525 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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