DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Egm and acox3

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_998312.1 Gene:acox3 / 406421 ZFINID:ZDB-GENE-040426-2163 Length:692 Species:Danio rerio


Alignment Length:592 Identity:111/592 - (18%)
Similarity:197/592 - (33%) Gaps:191/592 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 EESP-EQQRKLPTREPLAKNFFIGVVDKELLAYPEVIPRDEMAQLENSLLPLKNYFVEPRETEET 117
            |:.| ||:|:|.         |:..  |:|..| :.|.|:|:.|....:..|.:.          
Zfish    59 EDVPVEQKRELT---------FLRC--KQLFKY-DFITREELMQNPWKMTVLNDC---------- 101

  Fly   118 SPETLRQLGLYGLNVSTDY-EGKG-YGWSASLMASEPDSTDINVTLGLQTHRVVVDLLKEVGTPL 180
                   ||:|..::...| ..|| :|           :|.:|.  |.|.|              
Zfish   102 -------LGMYDWSLCAKYFLNKGMFG-----------ATVVNT--GSQRH-------------- 132

  Fly   181 QQQRYLQDLATGKLIGTEAIYEISPPEED-YFNTTAELFPEYGKWQLNGEKSFVICTPG-ERQLF 243
              .::::|:......|..::.|:|..... ...|||:..|        ..:.|||.:|. |...|
Zfish   133 --LKFVKDIERMMTFGCFSLTELSHGSNTRALRTTAKYDP--------NTQEFVINSPDFEAAKF 187

  Fly   244 ------------LVLAQTQQPNVPGVLGR--GTTIFLVDSQ-------QEGVRLGEKHATFGCRK 287
                        :|.||...|:     |:  |...|:|..:       ..||.:|:.....|...
Zfish   188 WVGNLGKTATHSVVFAQLYTPD-----GKCHGLHSFIVQVRDPKTLLAMPGVMVGDMGKKLGQNG 247

  Fly   288 AEIRRVHFEGVKLGEDQVVGLPHD--------------GNRYSEQL--VRSSRL---RGSLVGLS 333
            .:.....|..|::..:.::....|              ..|:...|  :...|:   |.:||.|.
Zfish   248 LDNGFAVFHNVRIPRENLLNKTGDVAPDGQYVSPFKDPNKRFGASLGALSGGRVGITRMALVNLK 312

  Fly   334 LAKKLLNELAQYTVNTTQCG------VQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFRA 392
            ||   :....:::....|.|      :.:.:.:|.:..:...:.:|||:|.              
Zfish   313 LA---VTVAVRFSATRRQFGPKEDEEIPVLEYQLQQWRLIPFLAAVYALEH-------------- 360

  Fly   393 QDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLCTQGESLDTLGMFIA 457
                    .||.|::..|    ...:|::....  |....|||....|..|..    ..||.:.|
Zfish   361 --------FTKSFSMNFV----EFQMGLLMKDK--SDRQAELGREIHALSCAS----KPLGSWTA 407

  Fly   458 LTGLQHAGQAMNTGVRKSRNPLFNPGHIF------GKFLDNNSI------DNPKTKMQLSEHVHP 510
            ..|:|...:|..             ||.:      |...|:|..      ||.....|.|.:   
Zfish   408 QRGIQECREACG-------------GHGYLAMNRLGDMRDDNDPNCTYEGDNNVLLQQTSNY--- 456

  Fly   511 SLEAAAQCIELSVARLQMAVELMFTKHGNAVVERQSEMQRLAEVGTLIYAMWASVARASRSYCIG 575
             |.:..|..:....|::..:|.:     |.:.:..|.:|....||::...|.::|..|:..:.:.
Zfish   457 -LLSWIQHKQEGKGRIESPLETV-----NFLDDMSSILQSKFTVGSVEECMNSAVPLAAYKWLVC 515

  Fly   576 LPLADHE 582
            ..|.:.:
Zfish   516 FLLGESQ 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 73/414 (18%)
CaiA 122..439 CDD:224871 66/366 (18%)
acox3NP_998312.1 AXO 11..664 CDD:173839 111/592 (19%)
PLN02312 19..662 CDD:215178 111/592 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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