DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Egm and Mcad

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster


Alignment Length:434 Identity:99/434 - (22%)
Similarity:167/434 - (38%) Gaps:71/434 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KLLTRGRSTKATSSSLDSQHQDAATTEGGRAESVEESPEQQRKLPTRE---PLAKNFFIGVVDKE 81
            :|:::.|:..|.|      |.....|.....|...:..|..||. |||   |:|..:     ||.
  Fly    14 QLVSQSRAYAAVS------HVSPNGTSFALTEDQLQLQELARKF-TREEIIPVAAQY-----DKS 66

  Fly    82 LLAYP-EVIPRDEMAQLENSLLPLKNYFVEPRETEETSPETLRQLGLYGLNVST---DYEGKGYG 142
             ..|| .:|.:.....|.|:.:|                   ..:|...|:|.|   ..|...||
  Fly    67 -GEYPWPIIKKAWELGLMNNHIP-------------------ADIGGLDLDVFTTCLSAEELAYG 111

  Fly   143 WSASLMASEPDSTDINVTLGLQTHRVVVDLLKEVGTPLQQQRYLQDLATGKLIGTEAIYEISPP- 206
            .:..:.|.|..        ||....|::...||     |:::||..|....|:   |.|.::.| 
  Fly   112 CTGIMTALEAS--------GLGQTPVILSGNKE-----QKKKYLGRLLEEPLV---AAYCVTEPG 160

  Fly   207 ---EEDYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFLVLAQTQ-QPNVPGVLGRGTTIFLV 267
               :.....|.||  .:..:|.:||:|.: |...|....:.|||:|. .|..|.  .:..|.|:|
  Fly   161 AGSDVSGIKTRAE--KKGDEWVINGQKMW-ITNGGVANWYFVLARTNPDPKCPP--SKAFTGFIV 220

  Fly   268 DSQQEGVRLGEKHATFGCRKAEIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRLRGSLV-- 330
            :....|:..|.|....|.|.::.|.:.||.|::.::.|  |..:|..:...:....:.|..:.  
  Fly   221 ERDSPGLTPGRKELNMGQRASDTRGITFEDVRVPKENV--LIGEGAGFKIAMGTFDKTRPPVAAG 283

  Fly   331 GLSLAKKLLNELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFRAQDV 395
            .:.||::.|:|..:|.:.....||.:...:..:..::.....|........|:|..:|:.|..  
  Fly   284 AVGLAQRCLDEALKYALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRRN-- 346

  Fly   396 TLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDA 439
            :..::|.|.........|||..:.:.|.....|....|..:|||
  Fly   347 SYYASIAKCHAADMANKIASDAVQIFGGNGFNSEYPVEKLMRDA 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 79/358 (22%)
CaiA 122..439 CDD:224871 74/326 (23%)
McadNP_648149.1 CaiA 35..411 CDD:224871 93/407 (23%)
MCAD 37..414 CDD:173846 93/405 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.