DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and GCDH

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_000150.1 Gene:GCDH / 2639 HGNCID:4189 Length:438 Species:Homo sapiens


Alignment Length:480 Identity:103/480 - (21%)
Similarity:187/480 - (38%) Gaps:93/480 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KLLTRGRSTKATSSSLDSQHQDAATTEGGRAESVEESPEQQRKLPTREPLAKNFFIGVVDKELLA 84
            :||:||.......:.:.|.   |.|.:|||.:| :.:...:.:...::||        |.:|.|.
Human     9 RLLSRGPGLHVLRTWVSSA---AQTEKGGRTQS-QLAKSSRPEFDWQDPL--------VLEEQLT 61

  Fly    85 YPEVIPRDEM-AQLENSLLP---LKNYFVEPRETEETSPETLRQLGLYGLNVSTDYEGKGYGWSA 145
            ..|::.||.. ...:..|:|   |.|      ..|....|.:.::|..|:...|.   ||||.:.
Human    62 TDEILIRDTFRTYCQERLMPRILLAN------RNEVFHREIISEMGELGVLGPTI---KGYGCAG 117

  Fly   146 ------SLMASEPDSTD------INVTLGLQTHRVVVDLLKEVGTPLQQQRYLQDLATGKLIGTE 198
                  .|:|.|.:..|      ::|...|..|.:..     .|:..|:|:||..||.|:|:|..
Human   118 VSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYA-----YGSEEQRQKYLPQLAKGELLGCF 177

  Fly   199 AIYE-ISPPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFLVLAQTQQPNVPGVLGRGT 262
            .:.| .|..:.....|.|........:.|||.|:::..:| ...||:|.|:.:...:.|      
Human   178 GLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSP-MADLFVVWARCEDGCIRG------ 235

  Fly   263 TIFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFEGVKLGEDQVV-GLPHDGNRYSEQLVRSSRLR 326
              ||::....|:........|..|.:....:..:||::.|:.|: |....|..:.  .:.::|..
Human   236 --FLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSLGGPFG--CLNNARYG 296

  Fly   327 GSLVGLSLAKKLLNELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGL----- 386
            .:...|..::..|:...||.::..|.||.|...:|.:..::         :.:..:|.||     
Human   297 IAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLA---------DMLTEITLGLHACLQ 352

  Fly   387 LDEFRAQDVTLESAIT--KYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLCTQGESL 449
            |...:.||......::  |.....:...||.|      .:.:|.|.    |:.|...:.....:|
Human   353 LGRLKDQDKAAPEMVSLLKRNNCGKALDIARQ------ARDMLGGN----GISDEYHVIRHAMNL 407

  Fly   450 DTLGMF------------IALTGLQ 462
            :.:..:            .|:||:|
Human   408 EAVNTYEGTHDIHALILGRAITGIQ 432

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 81/401 (20%)
CaiA 122..439 CDD:224871 72/337 (21%)
GCDHNP_000150.1 GCD 48..434 CDD:173840 92/437 (21%)