DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and Acadl

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_036951.1 Gene:Acadl / 25287 RGDID:2011 Length:430 Species:Rattus norvegicus


Alignment Length:422 Identity:93/422 - (22%)
Similarity:169/422 - (40%) Gaps:55/422 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ASRLLTYSRNGKLLTRGRSTKATSSSLDSQHQDAATTEGGRAESVEESPEQQRKLPTREPLAKNF 73
            |:|||.           ||.:..|:.       :||.....|.......|.:.:.|:.:.|..  
  Rat     2 AARLLL-----------RSLRVLSAR-------SATLPPPSARCSHSGAEARLETPSAKKLTD-- 46

  Fly    74 FIGVVDKELLAYPEVIPRDEMAQ-LENSLLPLKNYFVEPRETEETSPETLRQLGLYGLNVSTDYE 137
             ||:  :.:.:....|.|:.:.: .:..::|....:.:..|......|...:.||.|:|::..:.
  Rat    47 -IGI--RRIFSSEHDIFRESVRKFFQEEVIPYHEEWEKAGEVSRELWEKAGKQGLLGINIAEKHG 108

  Fly   138 GKGYGWSASLMASEPDSTDINVTLGLQTHR-VVVDLLKEVGTPLQQQRYLQDLATGKLIGTEAIY 201
            |.|....::.:..|..:.......|...|. :|:..:...||..|.::::..:..||.||..|:.
  Rat   109 GIGGDLLSTAVTWEEQAYSNCTGPGFSLHSDIVMPYIANYGTKEQIEQFIPQMTAGKCIGAIAMT 173

  Fly   202 EISPPEE-DYFNTTAELFPEYGKWQLNGEKSFVICTPG-ERQLFLVLAQT-QQPNVPGVLGRGTT 263
            |.....: ....|.|:  .....|.|||.|.|:  |.| ...|.:|:|.| ::...|   ..|.:
  Rat   174 EPGAGSDLQGVRTNAK--RSGSDWILNGSKVFI--TNGWLSDLVIVVAVTNREARSP---AHGIS 231

  Fly   264 IFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRLRGS 328
            :|||::..:|...|:|....|.:..:...:.||.|:|....::|..:.|..|..|.:...||..:
  Rat   232 LFLVENGMKGFIKGKKLHKMGMKAQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIA 296

  Fly   329 LVGLSLAKKLLNELAQYTVNTTQCG--------VQLQDLEL-TRIHMSRAMCSVYAMESMLYLTA 384
            .:.:|..:.:..|...|.......|        ||.:..|| |.|.::||.     ::|.|.   
  Rat   297 DLAISACEFMFEETRNYVRQRKAFGKTVAHIQTVQHKLAELKTNICVTRAF-----VDSCLQ--- 353

  Fly   385 GLLDEFRAQDVTLESAITKYFTLRQVYAIASQ 416
              |.|.:..| :..:::.||:.......:|.|
  Rat   354 --LHETKRLD-SASASMAKYWASELQNTVAYQ 382

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 76/339 (22%)
CaiA 122..439 CDD:224871 73/308 (24%)
AcadlNP_036951.1 CaiA 53..427 CDD:224871 78/348 (22%)
LCAD 56..427 CDD:173849 78/345 (23%)