DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Egm and acdh-10

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001294824.1 Gene:acdh-10 / 24104866 WormBaseID:WBGene00020366 Length:417 Species:Caenorhabditis elegans


Alignment Length:273 Identity:46/273 - (16%)
Similarity:91/273 - (33%) Gaps:83/273 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 KRFLENHLASQQQAGATTNAPATSNNTVQSQPPGAATGATAPAPTSRPSSRNEKSTTPRP---ST 386
            |:..|.:.|.:..|...|.....|..|:..:                   ..||.|..:|   .|
 Worm    13 KKLFEKNSAKKAAAAEATKTFDESKETINKE-------------------IEEKKTELQPKVVET 58

  Fly   387 HDSPSP-----VPSPAGASLRYDGRKMSSFAHHKLKMVNYNNAGAADHHRNHLGAGGGGGPLSSS 446
            :::.|.     |..|..|.|:.:...:..:....:| :.:..:.|.....:..|||...||::  
 Worm    59 YEATSAEVKALVRDPKVAGLKKNSAAVQKYLEELVK-IEFPGSKAVSEASSSFGAGYVAGPVT-- 120

  Fly   447 STSSHSAQQQQQQQQQQQQQQHQLRLEEEGALDLRNSATGSMLGGSSVGGMLAEESSLRGSGSNS 511
                 ...::......::.:..::.:||                      :.|||.:.....:.:
 Worm   121 -----FIFEKVSVFLPEEVKTKEIPVEE----------------------VKAEEPAKTEEPAKT 158

  Fly   512 NGSTGSTGTDILDLSMPDKNSMTEVCYVCGDEHRRGSLMEIATVKPKDVKDQEKPYFPIFDETHA 576
            .|::|            :|..:.|       |.::|...|.|.|:.|..:.:||.     :|...
 Worm   159 EGTSG------------EKEEIVE-------ETKKGETPETAVVEEKKPEVEEKK-----EEATP 199

  Fly   577 RPA--RSRPKDPK 587
            .||  .:..|:|:
 Worm   200 APAVVETPVKEPE 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 24/139 (17%)
acdh-10NP_001294824.1 MCAD 31..408 CDD:173846 41/255 (16%)

Return to query results.
Submit another query.