DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Egm and Acad9

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_766266.3 Gene:Acad9 / 229211 MGIID:1914272 Length:625 Species:Mus musculus


Alignment Length:641 Identity:181/641 - (28%)
Similarity:297/641 - (46%) Gaps:51/641 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LLTRGRSTKATSSSLDSQHQDAATTEGGRAESV-EESPEQQRKLPTRE---PLAKNFFIGVVD-K 80
            ||:||.:..|.::               ||..| .|...::|.|.|..   ..||..|:|.:: |
Mouse     6 LLSRGATAAAAAA---------------RASRVLREFTARRRPLHTSLQSCSFAKELFLGNIEQK 55

  Fly    81 ELLAYPEVIPRDEMAQLENSLLPLKNYFVEPRETEETSP---------ETLRQLGLYGLNVSTDY 136
            .:..:||| .:.|::::...:.||:.:|.|..::.:...         |.|:.|||:|:.|..:|
Mouse    56 GVFPFPEV-SQHELSEINQFVGPLEKFFTEEVDSRKIDQEGKIPVDTLEKLKSLGLFGIQVPEEY 119

  Fly   137 EGKGYGWSASLMASEPDSTDINVTLGLQTHRVVVDLLKE---VGTPLQQQRYLQDLATGKLIGTE 198
            .|.|...:......|..|.|.::|:.|..|:.:.  ||.   ||...|:.:||..|::|:.|...
Mouse   120 GGLGLSNTMYARLGEIISLDASITVTLAAHQAIG--LKGIILVGNEEQKAKYLPKLSSGEHIAAF 182

  Fly   199 AIYE-ISPPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFLVLAQTQQPNVPGVLGRGT 262
            .:.| .|..:.....|.|.|..:...:.|||.|.: |...|...:|.|.|:|:..:..|......
Mouse   183 CLTEPASGSDAASIQTRATLSEDKKYFILNGSKVW-ITNGGLANIFTVFAKTEVVDSDGSKTDKM 246

  Fly   263 TIFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRL-R 326
            |.|:|:....|:..|:.....|.|.:....||||..::..:.|:|....|.:.:..::.|.|. .
Mouse   247 TAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSM 311

  Fly   327 GSLVGLSLAKKLLNELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFR 391
            ||.|. .:.|||:...|:|.....|....|.:..|.:...:......|.||||.|||:|:||:..
Mouse   312 GSAVA-GMLKKLIELTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPG 375

  Fly   392 AQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLCTQGESLDTLGMFI 456
            ..|.::|:|:.|.|:....:...|:.|.::|....:.....|..||||..|.....:.:.|.:||
Mouse   376 FPDCSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFI 440

  Fly   457 ALTGLQHAGQAMNTGVR--KSRNPLFNPGHIFGKFLDN--NSIDNPKTKMQLSEH---VHPSLEA 514
            |||||||||:.:.:.::  ||.|.......|..|..|:  .::|     :.|:..   |||||..
Mouse   441 ALTGLQHAGRILTSRIKELKSGNVTTVMETIGRKLRDSLGRTVD-----LGLTGDLGVVHPSLGD 500

  Fly   515 AAQCIELSVARLQMAVELMFTKHGNAVVERQSEMQRLAEVGTLIYAMWASVARASRSYCIGLPLA 579
            :|..:|.:|......||.:..:.|..:||.|..::|:|.:...:|.|.|.::|||||..|||...
Mouse   501 SANKLEENVHYFGRTVETLLLRFGKNIVEEQLVLKRVANILINLYGMTAVLSRASRSIRIGLRNH 565

  Fly   580 DHELLTATAICSEGRDRVRTLCTEIYGGHFVNNDNNLVRLSKQVAKSKGYFAVHPL 635
            |||:|.|...|.|...:.....:::......|.|..:.::|:|:.:.:.|...|||
Mouse   566 DHEVLLANMFCVEAYFQNLFSLSQLDKNAPENLDEQIKKVSRQILEKRAYICAHPL 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 101/378 (27%)
CaiA 122..439 CDD:224871 90/321 (28%)
Acad9NP_766266.3 VLCAD 42..449 CDD:173850 117/411 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3064
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.760

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