DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acox-1.3

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_493263.1 Gene:acox-1.3 / 184167 WormBaseID:WBGene00008566 Length:660 Species:Caenorhabditis elegans


Alignment Length:585 Identity:105/585 - (17%)
Similarity:199/585 - (34%) Gaps:178/585 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 RDEMAQLENSLLPLKNYFVEPRET--------EETSPETLRQLGLYGLNVSTDYEGKGYGWSASL 147
            |:|:|.....|....:...|..|:        ||...|:.|:|.:...:           |:.:.
 Worm    33 REEIASRRRQLTESISRIHELAESKPLVFMTREEKIAESCRKLEVLSRH-----------WNQTP 86

  Fly   148 MASEPDSTDINV---TLGLQTH------RVVVDLLKEVGTPLQQQRYLQDLATGKLIGTEAIYEI 203
            ...:.:...:::   .||::.|      .:.:..|....:..||:::|......::||..|..|:
 Worm    87 FNRDNEEDALHIYREVLGMEGHPLALHDTMFIPTLVAQASQEQQEKWLGRARRKEIIGCYAQTEM 151

  Fly   204 SPPEE-DYFNTTAELFPEYGKWQLNGEKSFVICTPGERQL------------------------- 242
            ..... ....|||...|:        .:.|::.||....|                         
 Worm   152 GHGTNLRKLETTATYSPD--------TQEFILNTPTITALKWWPGALGKSSNNAIVVANLLIKDQ 208

  Fly   243 ------FLVLAQTQQPNVP--------------------GVLGRG------TTIFLVDSQQE--G 273
                  |:|..:.::.::|                    |.||..      |.:.:..::.|  |
 Worm   209 NYGPHPFMVQLRDEKTHIPLKGIVVGDIGPKMAFNGADNGYLGFNNHRIPRTNLLMRHTKVEANG 273

  Fly   274 VRLGEKHATFGCR---KAEIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRLRGSLVGLSLA 335
            ..:...||..|..   |...|....:|:.|....|:.:     |||     :.|.:|.|...:..
 Worm   274 TYIKPSHAKIGYSSMVKVRSRMAMDQGLFLASALVIAV-----RYS-----AVRRQGFLEDKTQK 328

  Fly   336 KKLLNELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFRAQDVTLESA 400
            .|:|:             .|.|...|.. .::||...::.....::|.:.||     :||.:.:.
 Worm   329 VKVLD-------------YQTQQHRLFP-SLARAYAFIFTGFETIHLYSQLL-----KDVDMGNT 374

  Fly   401 ITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLCTQGESLDTLGMFI------ALT 459
                ..:..::|:.|      |.||:::.:|.| |:..|...|  ||...::..:|      |:.
 Worm   375 ----SGMADLHALTS------GLKSVVTHQTGE-GIEQARMAC--GEHGYSMASYISEIYGVAIG 426

  Fly   460 GLQHAGQAM-----------------NTGVRKSRNPLFNPGHIFGKFLDNNSIDNPKTKMQLSEH 507
            |..:.|:.|                 .:|..|...|:.:.....|...|.:|::...|..:    
 Worm   427 GCTYEGENMVMLLQLARYLVKSVELIKSGEEKKLGPMVSYLAAKGGHPDLSSLNGYVTAFE---- 487

  Fly   508 VHPSLEAAAQCIELSVARLQMAVELMFTKHGNAVVERQS--EMQRLAEVGTLIYAMWASVARASR 570
             |.:...|.:..|       ..::||.|.....|...:|  |:.|.:.:.|.::.:.|.:.|.||
 Worm   488 -HMARRQAWKATE-------KFLKLMETGESREVAWNKSAVELTRASRLHTRLFIIEAFMRRVSR 544

  Fly   571  570
             Worm   545  544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 78/450 (17%)
CaiA 122..439 CDD:224871 65/388 (17%)
acox-1.3NP_493263.1 ACAD 11..634 CDD:299127 105/585 (18%)
PLN02443 12..657 CDD:178062 105/585 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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