DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acox-1.3

DIOPT Version :10

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_493263.1 Gene:acox-1.3 / 184167 WormBaseID:WBGene00008566 Length:660 Species:Caenorhabditis elegans


Alignment Length:585 Identity:105/585 - (17%)
Similarity:199/585 - (34%) Gaps:178/585 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 RDEMAQLENSLLPLKNYFVEPRET--------EETSPETLRQLGLYGLNVSTDYEGKGYGWSASL 147
            |:|:|.....|....:...|..|:        ||...|:.|:|.:...:           |:.:.
 Worm    33 REEIASRRRQLTESISRIHELAESKPLVFMTREEKIAESCRKLEVLSRH-----------WNQTP 86

  Fly   148 MASEPDSTDINV---TLGLQTH------RVVVDLLKEVGTPLQQQRYLQDLATGKLIGTEAIYEI 203
            ...:.:...:::   .||::.|      .:.:..|....:..||:::|......::||..|..|:
 Worm    87 FNRDNEEDALHIYREVLGMEGHPLALHDTMFIPTLVAQASQEQQEKWLGRARRKEIIGCYAQTEM 151

  Fly   204 SPPEE-DYFNTTAELFPEYGKWQLNGEKSFVICTPGERQL------------------------- 242
            ..... ....|||...|:        .:.|::.||....|                         
 Worm   152 GHGTNLRKLETTATYSPD--------TQEFILNTPTITALKWWPGALGKSSNNAIVVANLLIKDQ 208

  Fly   243 ------FLVLAQTQQPNVP--------------------GVLGRG------TTIFLVDSQQE--G 273
                  |:|..:.::.::|                    |.||..      |.:.:..::.|  |
 Worm   209 NYGPHPFMVQLRDEKTHIPLKGIVVGDIGPKMAFNGADNGYLGFNNHRIPRTNLLMRHTKVEANG 273

  Fly   274 VRLGEKHATFGCR---KAEIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRLRGSLVGLSLA 335
            ..:...||..|..   |...|....:|:.|....|:.:     |||     :.|.:|.|...:..
 Worm   274 TYIKPSHAKIGYSSMVKVRSRMAMDQGLFLASALVIAV-----RYS-----AVRRQGFLEDKTQK 328

  Fly   336 KKLLNELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFRAQDVTLESA 400
            .|:|:             .|.|...|.. .::||...::.....::|.:.||     :||.:.:.
 Worm   329 VKVLD-------------YQTQQHRLFP-SLARAYAFIFTGFETIHLYSQLL-----KDVDMGNT 374

  Fly   401 ITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLCTQGESLDTLGMFI------ALT 459
                ..:..::|:.|      |.||:::.:|.| |:..|...|  ||...::..:|      |:.
 Worm   375 ----SGMADLHALTS------GLKSVVTHQTGE-GIEQARMAC--GEHGYSMASYISEIYGVAIG 426

  Fly   460 GLQHAGQAM-----------------NTGVRKSRNPLFNPGHIFGKFLDNNSIDNPKTKMQLSEH 507
            |..:.|:.|                 .:|..|...|:.:.....|...|.:|::...|..:    
 Worm   427 GCTYEGENMVMLLQLARYLVKSVELIKSGEEKKLGPMVSYLAAKGGHPDLSSLNGYVTAFE---- 487

  Fly   508 VHPSLEAAAQCIELSVARLQMAVELMFTKHGNAVVERQS--EMQRLAEVGTLIYAMWASVARASR 570
             |.:...|.:..|       ..::||.|.....|...:|  |:.|.:.:.|.::.:.|.:.|.||
 Worm   488 -HMARRQAWKATE-------KFLKLMETGESREVAWNKSAVELTRASRLHTRLFIIEAFMRRVSR 544

  Fly   571  570
             Worm   545  544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 78/450 (17%)
acox-1.3NP_493263.1 ACAD 11..634 CDD:447864 105/585 (18%)

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