DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acox-1.6

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_510603.2 Gene:acox-1.6 / 181668 WormBaseID:WBGene00010336 Length:667 Species:Caenorhabditis elegans


Alignment Length:592 Identity:117/592 - (19%)
Similarity:196/592 - (33%) Gaps:202/592 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 FIGVVDKELLAYPEVIPRDEMAQLENSLLPLKNYFVEPRETEETSPETLRQLGLYGLNVSTDYEG 138
            |:..||.    :.:.:|.:.|::.|..|...:........|::..              .:|:.|
 Worm    47 FVKSVDD----FKDPVPTEFMSREERILNNARKVVAMTNNTDQID--------------GSDFFG 93

  Fly   139 KGYGWSASLMASEPDSTDINVTLGLQTHRVVVDLLKEVGTPLQQQ-------RYLQDLATGKLIG 196
            :|..:.|             :|:|...|.:.:..:..:.| ||.|       .:|....:..::|
 Worm    94 EGMYYQA-------------LTMGRDLHAMSLHYVMFIPT-LQGQTDDDQLDEWLTKAISRAVVG 144

  Fly   197 TEAIYEISPPEE-DYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFLVLAQTQQPNVPGVLG- 259
            |.|..|:..... ....|||...|        ..:.||:.:|         ..|.....||.|| 
 Worm   145 TYAQTELGHGTNLSKLETTATYDP--------ATEEFVMNSP---------TITAAKWWPGGLGK 192

  Fly   260 -----------------RGTTIFLVDSQQE-------GVRLGEKHATFGC--------------- 285
                             :|...|:|..:.|       |:|||:.....|.               
 Worm   193 SSNYAVVVAQLYTKGECKGPHPFIVQLRDEDTHYPLKGIRLGDIGPKLGINGNDNGFLLFDKVRI 257

  Fly   286 -RKAEIRR---VHFEGV-------KLGEDQVVGLPHDGNRYSEQLVRSSRLRGSLVGLSLAKKLL 339
             |||.:.|   |:.:|.       |||...:|            .|||..::.....|:.|..:.
 Worm   258 PRKALLMRYAKVNPDGTYIAPAHSKLGYGTMV------------FVRSIMIKDQSTQLAAAATIA 310

  Fly   340 NELA----QYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFRAQDVTLESA 400
            ...|    |..:...:..||:.|.:..:..:...:...:|     ::.|.  .|.|...:|:...
 Worm   311 TRYAAVRRQGEITPGKGEVQIIDYQTQQFRVFPQLARAFA-----FMAAA--TEIRDLYMTVTEQ 368

  Fly   401 ITKYFT--LRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLC-------------------- 443
            :|...|  |.:::.::|      |.|||:|.:|.: |:......|                    
 Worm   369 LTHGNTELLAELHVLSS------GLKSLVSWDTAQ-GIEQCRLACGGHGYSQASGFPEIYGYAVG 426

  Fly   444 ---TQGESLDTLGMFIALTGLQHAGQAMNT--GVRKSRNPLFNPGHIFGKFLDNNSIDNPKTK-M 502
               .:||::..|        ||.|...|..  ||||....|.:.|...||         |..| .
 Worm   427 GCTYEGENIVML--------LQVARFLMKAAEGVRKGTANLADIGAYIGK---------PGRKTS 474

  Fly   503 QLSEHVHPSLEAAAQCIELSVARLQMAVELMFTKHGNAVVERQSEMQRLAEVGTLIYAMWASV-- 565
            :|:.|.|.:.....:.:| .|||.|     :|..:..  :::..|..|..:.       |.||  
 Worm   475 RLTTHHHYTDADIVEDLE-HVARKQ-----VFRAYDR--LKKAQEHLRPEDA-------WNSVSV 524

  Fly   566 --ARASR 570
              |:|||
 Worm   525 ELAKASR 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 81/452 (18%)
CaiA 122..439 CDD:224871 73/381 (19%)
acox-1.6NP_510603.2 PLN02443 8..661 CDD:178062 117/592 (20%)
ACAD 12..639 CDD:299127 117/592 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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