DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acdh-13

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_501452.1 Gene:acdh-13 / 177654 WormBaseID:WBGene00001566 Length:617 Species:Caenorhabditis elegans


Alignment Length:607 Identity:147/607 - (24%)
Similarity:261/607 - (42%) Gaps:72/607 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 REPLAKNFFIGVVDKELLAYPEVIPRDEMAQLENSL--------LPLKNYFVEPRETEETSP--E 120
            :..|::.|.:...:|:.:.|||....|::..:|..:        |.:.:..:| :|.:..|.  |
 Worm    50 KRSLSRGFAMNKFEKDFMIYPEYTDSDDVRNIEGFVDVLRKSLELSVDSKLIE-KEGKLASDTIE 113

  Fly   121 TLRQLGLYGLNVSTDYEGKGYGWSASLMASEPDSTDINVTLGLQTHRVVVDLLKEVGTPLQQQRY 185
            .||...::.|.:...::|.|..........|..|.|.||........:|.::|...|:..|:.:|
 Worm   114 ALRSNAIFSLAIGKYFDGIGMCNKDLSKVFEELSVDWNVYTTSHISLLVANILTIYGSDEQKSKY 178

  Fly   186 LQDLATGKLIGTEAIYEISPPEEDYFNTTAELFPEY----GKWQLNGEKSFVICTPGERQLFLVL 246
            |..|.:|||....||.:         :|...:..:.    ||..|||:...|:   |.       
 Worm   179 LGILGSGKLRPAVAIVK---------DTNGGVCEQTAGPGGKSMLNGQNIRVM---GH------- 224

  Fly   247 AQTQQPNVPGVLGRGT---TIFLVDSQQEGVR---LGEKHATFGCRKAEIRRVHFEGVKLGEDQV 305
               ...|...|.|...   |.||:|..:.|..   ...:..|.|.:..::.|:....: :.:..:
 Worm   225 ---HNANFYVVFGNNNGEKTCFLLDEAELGTTDKIQFTRDETIGLKGIDVGRIELTAL-VTDKNL 285

  Fly   306 VGLPHDGNRYSEQLVRSSRLRGSLVGLSLAKKLLNELAQY---TVNTTQCGVQLQDLELTRIHMS 367
            :|.|..|:..:.:||.|.|:..:...:.:|::.|.||:.:   |.:.......|.|...::..::
 Worm   286 LGTPGHGSEIASELVGSGRMPFAAATIGMARRALRELSIWCNRTPSRQNDRTTLADDSRSQRIVT 350

  Fly   368 RAMCSVYAMESMLYLTAGLLDEFRAQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETT 432
            .....|||:||.||..:||:||..:..|.:|:::....|...:.|:.|..|.:||..:..:....
 Worm   351 ELALKVYALESSLYYLSGLIDEGLSVVVDIENSLLSIMTRDVLQAVISAQLELVGVAASDASFPH 415

  Fly   433 ELGLRDAAQLCT---QGESLDTLGMFIALTGLQHAGQAMNTGVRKSRNPLFNPGHIFGKFLDN-- 492
            |...||...|.:   :|..::.:|:....|      .|.:|..::..:.|       .::|.|  
 Worm   416 EKLFRDVTTLLSIIDEGADVEQIGLATIAT------WATSTSHKRVVSTL-------KRWLKNEK 467

  Fly   493 --NSIDNPKTKMQLSEHVHPSLEAAAQCIELSVARLQMAVELMFTKHGNAVVERQSEMQRLAEVG 555
              :.:.||.....::||.||||:.|.|.:|.|::|:...|..:.|..|..:.:....::.|..|.
 Worm   468 EADELRNPGLSHYIAEHAHPSLQLACQELEFSMSRINNVVSKLLTSQGKNIEQDYGSLEALVNVL 532

  Fly   556 TLIYAMWASVARASRSYCIGLPLADHELLTATAICSE-GRDRVRTL--CTEIYGGHFVNNDNNLV 617
            .....|.::::||||||.|||..||.||..||.|||. .|.....|  .::::|  .|..:.:|:
 Worm   533 KNNLVMVSTISRASRSYSIGLRNADIELAWATIICSRLSRATWFELDSLSDLFG--LVRFNPSLL 595

  Fly   618 RLSKQVAKSKGYFAVHPLTFNF 639
            ...:.|....||....||..|:
 Worm   596 NAGRAVFDLGGYIIESPLEKNW 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 87/390 (22%)
CaiA 122..439 CDD:224871 76/329 (23%)
acdh-13NP_501452.1 ACAD 57..434 CDD:299127 91/400 (23%)
CaiA 102..437 CDD:224871 83/358 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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