DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acdh-11

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001033378.1 Gene:acdh-11 / 176477 WormBaseID:WBGene00012860 Length:617 Species:Caenorhabditis elegans


Alignment Length:508 Identity:98/508 - (19%)
Similarity:185/508 - (36%) Gaps:121/508 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 PRETEETSPETLRQLGLYGLN-VSTDYEGK------GYGW-SASLMASEPDSTDINVTLGLQTHR 167
            |....:.:.:||..|.|||.: ::|:...:      ...| |...|..:...:|  |..|..|:.
 Worm   163 PMAMTDGAVKTLTSLNLYGKHKLATEAVDRLRSRDPSKAWTSGQWMTEKKGGSD--VAGGCDTYA 225

  Fly   168 VVVDLLKEVGTPLQQQRYLQDLATGKLIGTEAIYEISPPEEDYFNTTAELFPEYGKWQLNGEKSF 232
            |.:|               :|  |.:|.|.:  :..|..:.|...|.|.:....|. .|.|.:..
 Worm   226 VQID---------------KD--TYRLHGYK--WFSSAVDADVALTLARIVDSDGN-ALEGSRGL 270

  Fly   233 VICTPGERQLFLVLAQTQQPNVPGVLGRGTTIFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFEG 297
                    .|||:..:.:..|:.|:              :.|||..|..|.....||:.......
 Worm   271 --------SLFLLKIRDESGNLNGI--------------QMVRLKNKLGTKQLPTAELLLDGAIA 313

  Fly   298 VKLGEDQVVGLPHDGNRYSEQLVRSSRLRGSLVGLSLAKKLLNELAQYTV-----NTTQCGVQLQ 357
            .::| ||..|:....|     ::..:|:..::..|...:::::....|:.     ..||....|.
 Worm   314 ERIG-DQGRGVAGISN-----MLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLH 372

  Fly   358 DLELTRIHMSR--AMCSVYAMESMLYLT-AGLLDEFRAQDVTLESAITKYFTLRQVYAIASQNLG 419
            ...|.::.:..  :|..::....:|.|: ||...:..|..:.|.:.:.|.:..:|...:.|:.:.
 Worm   373 TTTLAKMEVDTRGSMLLLFEAARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPMVSEGIE 437

  Fly   420 VVGPKSLLSGETTELGLRDAA-----QLCTQGESLDTLGMFIALTGLQHAGQAMNTGVRKSRNPL 479
            ..|.:..:........||||.     :..|...|||.|.:|.....:..|               
 Worm   438 CFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDVLRVFSGKENILLA--------------- 487

  Fly   480 FNPGHIFGKFLDNNSIDNPKTKMQLSEHVHPSLEAAAQCIELSVARLQMAVELMFTKHGNAVVER 544
                  |||.:: ..:.|.||:.:       .|:.:.:.:|.::.:||.    :..|..::.::.
 Worm   488 ------FGKRVE-QLLGNTKTEDE-------KLKKSKEAVESALKQLQK----LLVKASDSAIQG 534

  Fly   545 QSEMQRLAE----------VGTLI--YAMWASVARAS-----RSYCIGLPLAD 580
            ::.:..:|.          .|.|:  :|..:|||..|     ..||...||.|
 Worm   535 ETRIDSVARHIAFTIARIYSGALLIDHASDSSVANQSDIEVAYRYCCEQPLID 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 73/366 (20%)
CaiA 122..439 CDD:224871 63/332 (19%)
acdh-11NP_001033378.1 AidB 46..480 CDD:173843 73/366 (20%)
ACAD <420..569 CDD:299127 32/181 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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