DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acox-1.5

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_499119.1 Gene:acox-1.5 / 176353 WormBaseID:WBGene00008167 Length:659 Species:Caenorhabditis elegans


Alignment Length:588 Identity:112/588 - (19%)
Similarity:182/588 - (30%) Gaps:189/588 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 SLMASEPDSTDINVTLGLQTHRVVVDLLKEVGTPL------------------QQQRYLQDLATG 192
            :||.|..:..|....|.:..  ::.|::...|.||                  |.:.:|.|...|
 Worm    80 NLMESVGEFADFTNNLDMLV--IIRDVMGIEGFPLALHNLMFVPTIQNQADDEQTEWWLMDALQG 142

  Fly   193 KLIGTEAIYEISPPEE-DYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFLVLAQTQQPNVPG 256
            |:|||.|..|:..... ....|||    .|.|.    .:.|:|.||         ..|.....||
 Worm   143 KIIGTYAQTELGHGTNLGAIETTA----TYDKL----TEEFIIHTP---------TTTATKWWPG 190

  Fly   257 VLGRGTT------IFLVD-------------------SQQEGVRLGEKHATFGCRKAEIRRVHFE 296
            .||...|      ..::|                   |...|||:|:.....|....:...:.|:
 Worm   191 GLGTSCTHVVLVANLIIDTKNYGLHPFFVPIRDRNSYSVMSGVRVGDIGTKMGVNCVDNGFLAFD 255

  Fly   297 GVKLGEDQVV---------GL----PHDGNRY-------SEQLVRSSRLRGSLVGLSLAKKLLNE 341
            ..::....::         ||    .|....|       ||.:...:......:.:|:....:..
 Worm   256 NYRIPRRNMLMKHSKVSKEGLYTAPSHPKVGYTTMLYMRSEMIYHQAYYLAMAMAISIRYSAVRR 320

  Fly   342 LAQYTVNTTQCGVQLQDLELT--RIHMSRAMCSVY-------------AMESMLYLTAGLLDEFR 391
            ..:....|.:  ||:.|.:..  ||....|.|..:             .::.:.:..:.:|.:..
 Worm   321 QGEIKPGTQE--VQILDYQTQQYRIFPGLARCFAFNTAAATVRQMTENCIKQLSHGNSDVLADLH 383

  Fly   392 AQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQL----------CT-Q 445
            |....|::.:|..         |||::...  :....|.    |..||:.|          || :
 Worm   384 ALSCGLKAVVTHQ---------ASQSIDQA--RQACGGH----GYSDASYLPTLYTCSVGACTYE 433

  Fly   446 GESLDTLGMFIALTGLQHAGQAMNTGVRKSRNPLFNPGHIFGKFLDNNSI--DNPKTKMQLS--E 506
            ||::..|        ||.:...|....:..:.....|   ...:|....|  .|.|....||  |
 Worm   434 GENMVML--------LQLSKYLMKAAAKAEKGEEMAP---LVAYLVKPDITETNDKFAKMLSHFE 487

  Fly   507 HV--HPSLEAAAQCIELSVARLQMAVELMFTKHGNAVVERQSEMQRLAEVGTLIYAM------WA 563
            |:  |..:.|..|.||..             |.|   :||.             ||.      |.
 Worm   488 HIARHRVMHAYRQMIEEE-------------KQG---IERD-------------YAFANHSVDWT 523

  Fly   564 SVARASRSYCIGLPLADHELLTATAICSEGRDRVRTLCTEIYGGHFVNNDNNLVRLSKQVAKSKG 628
            ..|||...    |.:|...:.:...:..|....|.|...|:|..:      .|:.:|..:. :.|
 Worm   524 KAARAHTK----LFIARGFVKSVQEVSDEAVHDVLTTLAELYLSY------ELIEMSADLT-ANG 577

  Fly   629 YFA 631
            |.:
 Worm   578 YLS 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 74/400 (19%)
CaiA 122..439 CDD:224871 66/371 (18%)
acox-1.5NP_499119.1 AXO 13..637 CDD:173839 112/588 (19%)
PLN02443 15..655 CDD:178062 112/588 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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