DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acdh-2

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001343623.1 Gene:acdh-2 / 173940 WormBaseID:WBGene00015894 Length:386 Species:Caenorhabditis elegans


Alignment Length:445 Identity:107/445 - (24%)
Similarity:174/445 - (39%) Gaps:81/445 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KLLTRGRSTKATSSSLDSQHQDAATTEGGRAESVEESPEQQRKLPTREPLAKNFFIGVVDKELLA 84
            ||.....||.:|:.|:.:|.|.       |...::...|.::||..:   .|||....|.     
 Worm     7 KLPISAISTFSTTGSISAQQQP-------RVFPLQHLNENEKKLVEK---VKNFAQSSVK----- 56

  Fly    85 YPEVIPRDEMAQLENSLLPLKNYFVEPRETEETSPETLRQLGLYGLNVSTDYEGKGYGWSASLMA 149
             |.|...|..|::...|  ||..|               .|.|.||.:...|.|.|..:...::|
 Worm    57 -PLVREMDRDARINKQL--LKKAF---------------DLKLMGLKIDPKYGGSGVSFFELVLA 103

  Fly   150 SEPDSTDINVTLGLQTH---RVVVDLLKEVGTPLQQQRYLQDLATGKLIGTEAIYEISPPEEDY- 210
            .| :.:.|:..:.|..|   .:|..|::|.|....:::||:.|.... :|..|:.|:....:.: 
 Worm   104 VE-ELSKIDPAIALIMHLQNALVAPLIEEFGNEELKEKYLKKLCKDS-VGAFALSEVVSGSDAFA 166

  Fly   211 FNTTAELFPEYGKWQLNGEKSFVICTPGERQLFLVLAQTQQPNVPGVLGRGTTIFLVDSQQEGVR 275
            ..|.|:...::  :.|||.|..:...| ....|||||...    |....||.|.|:||...|||.
 Worm   167 MQTVAKKDGDH--FILNGSKWGISNAP-IADFFLVLANAD----PEKGYRGVTCFIVDRDHEGVV 224

  Fly   276 LGEKHATFGCRKAEIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRLRGSLVGLSLAKKLLN 340
            |||:....|.|...|.:||...|::.:..:||....|.:|:.:::.:||:   ::|         
 Worm   225 LGEQDDNLGMRAGTIAQVHLNSVRVPKTSIVGEYGKGYKYAIEVLNASRI---VIG--------- 277

  Fly   341 ELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFRAQDVTLESAITKYF 405
                     .|.|:|.|        :::....:.|...|:|..|.:.|  .......|:::.||:
 Worm   278 ---------AQMGLQHQ--------IAKIQTEIEAARLMVYNCARMKD--CGMPFVKEASMAKYY 323

  Fly   406 TLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAA----QLCTQGESLDTLGMFI 456
            ..........|.:..:|..........|...|||.    ...|....|:|:..||
 Worm   324 APEVACKTTKQCIEWLGGVGFTKNFMAEKFYRDAVVGGIYEGTSNIQLNTIAKFI 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 89/373 (24%)
CaiA 122..439 CDD:224871 76/320 (24%)
acdh-2NP_001343623.1 ACAD 38..379 CDD:324545 98/407 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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